Sub-family 
- Id
- ORTHO006823
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000395
- Keywords
-
Overview of gene family content
- ath
- Arabidopsis thaliana (1 gene)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (2 genes)
- lja
- Lotus japonicus (1 gene)
- mdo
- Malus domestica (2 genes)
- mes
- Manihot esculenta (2 genes)
- mtr
- Medicago truncatula (1 gene)
- osa
- Oryza sativa ssp. japonica (2 genes)
- osaindica
- Oryza sativa ssp. indica (2 genes)
- ptr
- Populus trichocarpa (2 genes)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (2 genes)
The gene family ORTHO006823 has 24 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO006823
Page 1 of 2, showing 20 records out of 24 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AT2G19490 | ath | recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;recA DNA recombination family protein | transcript=eq;prot=eq; | + | 2 | No |
| BD2G57827 | bdi | pid=Bradi2g57827.1;tid=Bradi2g57827.1;GeneName=Bradi2g57827;transcript=eq;prot=eq | - | Bd2 | No | |
| CP00061G00090 | cpa | name=evm.TU.supercontig_61.9;pid=evm.TU.supercontig_61.9;prot=eq;transcript=eq | + | supercontig_61 | No | |
| FV1G09200 | fve | DNA repair protein recA homolog 3, mitochondrial, Precursor (putative) | transcript=eq;prot=eq;pid=gene12660 | - | LG1 | No |
| GM09G07400 | gma | 09 | pid=16275083;transcript=eq;prot=eq;name=Glyma09g07400.1 | - | Gm09 | No |
| GM17G06180 | gma | 17 | pid=16304593;transcript=eq;prot=eq;name=Glyma17g06180.1 | + | Gm17 | No |
| LJ4G024300 | lja | partial;prot=eq;transcript=eq;scaffold=CM0297;name=chr4.CM0297.60.nd | - | chr4 | No | |
| MD02G006750 | mdo | transcript=eq;prot=eq;pid=MDP0000237293;tid=MDP0000237293;contig=MDC004491.201 | - | 2 | No | |
| MD15G014950 | mdo | transcript=eq;prot=eq;pid=MDP0000272485;tid=MDP0000272485;contig=MDC004491.220 | - | 15 | No | |
| ME04343G00060 | mes | PACid=17982155;RNAname=cassava4.1_023594m;GeneName=cassava4.1_023594m.g;transcript=eq;prot=eq | + | scaffold04343 | No | |
| ME10493G00940 | mes | PACid=17990661;RNAname=cassava4.1_011189m;GeneName=cassava4.1_011189m.g;transcript=eq;prot=eq | + | scaffold10493 | No | |
| MT2G039670 | mtr | RecA (Fragment) (AHRD V1 *-*- C9DA10_9BURK); contains Interpro domain(s) IPR013765 RecA | transcript=eq;prot=eq;pid=Medtr2g039670.1; | - | 2 | No |
| OS01G67510 | osa | recA protein, putative, expressed | transcript=eq;prot=eq; | - | 1 | No |
| OS11G19720 | osa | recA protein, putative, expressed | transcript=eq;prot=eq; | - | 11 | No |
| OSINDICA_01G64100 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC004336; | - | Chr01 | No |
| OSINDICA_11G15170 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC034894; | - | Chr11 | No |
| PT06G14910 | ptr | PACid=17305300;name=POPTR_0006s15100;alias=pt019666m; | transcript=eq;prot=eq;protein_id=17305300; | + | scaffold_6 | No |
| PT18G06310 | ptr | PACid=17331681;name=POPTR_0018s06880;alias=pt008959m; | transcript=eq;prot=eq;protein_id=17331681; | - | scaffold_18 | No |
| RC29912G00640 | rco | name=29912.m005338;gene=29912.t000064;note=29912.t000064;transcript=eq;prot=eq | - | 29912 | No | |
| SB03G042890 | sbi | 3 | prot=eq;pid=5054197;tid=5054197 | - | chr_3 | No |