Sub-family  

Parent family
HOM000395
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO006823 has 24 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 24 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT2G19490 ath recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;recA DNA recombination family protein transcript=eq;prot=eq; + 2 No
BD2G57827 bdi pid=Bradi2g57827.1;tid=Bradi2g57827.1;GeneName=Bradi2g57827;transcript=eq;prot=eq - Bd2 No
CP00061G00090 cpa name=evm.TU.supercontig_61.9;pid=evm.TU.supercontig_61.9;prot=eq;transcript=eq + supercontig_61 No
FV1G09200 fve DNA repair protein recA homolog 3, mitochondrial, Precursor (putative) transcript=eq;prot=eq;pid=gene12660 - LG1 No
GM09G07400 gma 09 pid=16275083;transcript=eq;prot=eq;name=Glyma09g07400.1 - Gm09 No
GM17G06180 gma 17 pid=16304593;transcript=eq;prot=eq;name=Glyma17g06180.1 + Gm17 No
LJ4G024300 lja partial;prot=eq;transcript=eq;scaffold=CM0297;name=chr4.CM0297.60.nd - chr4 No
MD02G006750 mdo transcript=eq;prot=eq;pid=MDP0000237293;tid=MDP0000237293;contig=MDC004491.201 - 2 No
MD15G014950 mdo transcript=eq;prot=eq;pid=MDP0000272485;tid=MDP0000272485;contig=MDC004491.220 - 15 No
ME04343G00060 mes PACid=17982155;RNAname=cassava4.1_023594m;GeneName=cassava4.1_023594m.g;transcript=eq;prot=eq + scaffold04343 No
ME10493G00940 mes PACid=17990661;RNAname=cassava4.1_011189m;GeneName=cassava4.1_011189m.g;transcript=eq;prot=eq + scaffold10493 No
MT2G039670 mtr RecA (Fragment) (AHRD V1 *-*- C9DA10_9BURK); contains Interpro domain(s) IPR013765 RecA transcript=eq;prot=eq;pid=Medtr2g039670.1; - 2 No
OS01G67510 osa recA protein, putative, expressed transcript=eq;prot=eq; - 1 No
OS11G19720 osa recA protein, putative, expressed transcript=eq;prot=eq; - 11 No
OSINDICA_01G64100 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC004336; - Chr01 No
OSINDICA_11G15170 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC034894; - Chr11 No
PT06G14910 ptr PACid=17305300;name=POPTR_0006s15100;alias=pt019666m; transcript=eq;prot=eq;protein_id=17305300; + scaffold_6 No
PT18G06310 ptr PACid=17331681;name=POPTR_0018s06880;alias=pt008959m; transcript=eq;prot=eq;protein_id=17331681; - scaffold_18 No
RC29912G00640 rco name=29912.m005338;gene=29912.t000064;note=29912.t000064;transcript=eq;prot=eq - 29912 No
SB03G042890 sbi 3 prot=eq;pid=5054197;tid=5054197 - chr_3 No
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