Sub-family  

Parent family
HOM000079
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (5 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO006505 has 24 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 24 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G27760 aly name=fgenesh2_kg.4__2205__AT2G40830.1;pid=483145;prot=eq;tid=483145 + scaffold_4 No
AT2G40830 ath Encodes a putative RING-H2 finger protein RHC1a.;RING-H2 finger C1A transcript=eq;prot=eq; + 2 No
BD1G62350 bdi RING, subfamily zinc finger, C3HC4 type domain containing protein pid=Bradi1g62350.1;tid=Bradi1g62350.1;GeneName=Bradi1g62350;transcript=eq;prot=eq + Bd1 No
CP00039G00040 cpa name=evm.TU.supercontig_39.4;pid=evm.TU.supercontig_39.4;prot=eq;transcript=eq + supercontig_39 No
FV2G38790 fve RING finger protein 126 (probable) transcript=eq;prot=eq;pid=gene08499 - LG2 No
GM00G00075 gma 24 pid=16242669;transcript=eq;prot=eq;name=Glyma0024s00230.2 - scaffold_24 No
GM00G00080 gma 24 pid=16242668;transcript=eq;prot=eq;name=Glyma0024s00230.1 - scaffold_24 No
GM02G22760 gma 02 pid=16248541;transcript=eq;prot=eq;name=Glyma02g22760.1 - Gm02 No
GM02G44470 gma 02 pid=16250153;transcript=eq;prot=eq;name=Glyma02g44470.1 + Gm02 No
GM14G04340 gma 14 pid=16294323;transcript=eq;prot=eq;name=Glyma14g04340.1 - Gm14 No
LJ0G461260 lja partial;prot=eq;transcript=eq;scaffold=LjT39M07;name=LjT39M07.160.nd - chr0 No
MD00G385900 mdo transcript=eq;prot=eq;pid=MDP0000686485;tid=MDP0000686485;contig=MDC017460.233 + MDC017460.233 No
MD09G018630 mdo transcript=eq;prot=eq;pid=MDP0000252092;tid=MDP0000252092;contig=MDC017460.166 - 9 No
MD17G015090 mdo transcript=eq;prot=eq;pid=MDP0000919900;tid=MDP0000919900;contig=MDC025925.30 - 17 No
ME04050G00010 mes PACid=17993768;RNAname=cassava4.1_012645m;GeneName=cassava4.1_012645m.g;transcript=eq;prot=eq - scaffold04050 No
MT5G088720 mtr Thioredoxin-related protein (Fragment) (AHRD V1 **-- B3VWL4_POPTN); contains Interpro domain(s) IPR001841 Zinc finger, RING-type transcript=eq;prot=eq;pid=Medtr5g088720.1; + 5 No
OS03G22830 osa zinc finger, C3HC4 type domain containing protein, expressed transcript=eq;prot=eq; - 3 No
OSINDICA_03G22030 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC006501; - Chr03 No
PT06G02880 ptr PACid=17311876;name=POPTR_0006s03070;alias=pt018255m,grail3.0024018502,Pt-RHC1.2; transcript=eq;prot=eq;protein_id=17311876; - scaffold_6 No
PT16G02720 ptr PACid=17324352;name=POPTR_0016s02910;alias=pt003274m,estExt_Genewise1_v1.C_LG_XVI1068,Pt-RHC1.1; transcript=eq;prot=eq;protein_id=17324352; - scaffold_16 No
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