Sub-family  

Parent family
HOM000125
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO006367 has 24 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 24 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G25520 aly name=fgenesh2_kg.2__1945__AT1G76570.1;pid=476815;prot=eq;tid=476815 + scaffold_2 No
AT1G76570 ath Chlorophyll A-B binding family protein; FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.3 (TAIR:AT3G27690.1); Has 2289 Blast hits to 2229 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1997; Viruses - 0; Other Eukaryotes - 289 (source: NCBI BLink).;Chlorophyll A-B binding family protein transcript=eq;prot=eq; + 1 No
BD4G27480 bdi pid=Bradi4g27480.1;tid=Bradi4g27480.1;GeneName=Bradi4g27480;transcript=eq;prot=eq + Bd4 No
CP00050G01050 cpa name=evm.TU.supercontig_50.105;pid=evm.TU.supercontig_50.105;prot=eq;transcript=eq - supercontig_50 No
CR02G07970 cre name=SKA_estExt_fgenesh2_pg.C_50147;pid=205903;prot=eq;tid=205908;transcript=eq + chromosome_2 No
FV5G28070 fve Chlorophyll a-b binding protein of LHCII type III, chloroplastic (CAB), Precursor (probable) transcript=eq;prot=eq;pid=gene29152 - LG5 No
GM17G38220 gma 17 pid=16307424;transcript=eq;prot=eq;name=Glyma17g38220.1 + Gm17 No
LJ5G002520 lja partial;prot=eq;transcript=eq;scaffold=CM0335;name=chr5.CM0335.200.nc - chr5 No
MD06G000280 mdo transcript=eq;prot=eq;pid=MDP0000233260;tid=MDP0000233260;contig=MDC016649.157 - 6 No
ME06697G00040 mes PACid=17965185;RNAname=cassava4.1_010951m;GeneName=cassava4.1_010951m.g;transcript=eq;prot=eq - scaffold06697 No
MRCC299_05G01560 mrcc299 name=e_gw2.05.952.1;pid=82194;prot=eq;tid=82194;transcript=eq + Chr_05 No
OL11G00990 olu NULL name=ost_11_006_033,prot=none + Chr_11 No
OS09G12540 osa chlorophyll A%2DB binding protein, putative, expressed transcript=eq;prot=eq; + 9 No
OSINDICA_09G09580 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC028156; + Chr09 No
OT11G01060 ota putative chlorophyll a/b-binding protein (ISS); name=OT11G01060;protein_id=CAL55711.1;prot=eq + chrom11 No
PP00215G00660 ppa NULL name=estExt_fgenesh1_pm.C_2150017,pid=108014,prot=eq,tid=108014 - scaffold_215 No
PT05G26860 ptr PACid=17339236;name=POPTR_0005s28000;alias=pt033280m,estExt_Genewise1_v1.C_LG_V2296,Lhcb7; transcript=eq;prot=eq;protein_id=17339236; + scaffold_5 No
RC30170G07520 rco name=30170.m013809;gene=30170.t000221;note=30170.t000221;transcript=eq;prot=eq + 30170 No
SB02G020290 sbi 2 prot=eq;pid=5051013;tid=5051013 + chr_2 No
SM00030G01790 smo proteinId=104804;transcriptId=104804;name=e_gw1.30.437.1;transcript=eq;prot=eq - scaffold_30 No
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