Sub-family  

Parent family
HOM000004
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO006225 has 24 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 24 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G15110 aly name=fgenesh2_kg.1__1562__AT1G14370.1;pid=471608;prot=eq;tid=471608 + scaffold_1 No
AL5G01910 aly name=fgenesh2_kg.5__178__AT2G02800.1;pid=484186;prot=eq;tid=484186 - scaffold_5 No
AT1G14370 ath Encodes protein kinase APK2a.;protein kinase 2A transcript=eq;prot=eq; + 1 No
AT2G02800 ath Encodes protein kinase APK2b.;protein kinase 2B transcript=eq;prot=eq; - 2 No
BD1G73210 bdi protein kinase family protein, putative, expressed, subfamily RLCK-VIIa pid=Bradi1g73210.1;tid=Bradi1g73210.1;GeneName=Bradi1g73210;transcript=eq;prot=eq + Bd1 No
CP00183G00260 cpa name=evm.TU.supercontig_183.26;pid=evm.TU.supercontig_183.26;prot=eq;transcript=eq - supercontig_183 No
FV0G05870 fve Protein kinase 2B, chloroplastic, Precursor (similar to) transcript=eq;prot=eq;pid=gene03996 + scf0513158 No
GM01G05160 gma 01 pid=16243468;transcript=eq;prot=eq;name=Glyma01g05160.1 - Gm01 No
GM02G02340 gma 02 pid=16246716;transcript=eq;prot=eq;name=Glyma02g02340.1 + Gm02 No
GM08G40920 gma 08 pid=16273412;transcript=eq;prot=eq;name=Glyma08g40920.1 - Gm08 No
GM18G16060 gma 18 pid=16308935;transcript=eq;prot=eq;name=Glyma18g16060.1 + Gm18 No
MD13G005100 mdo transcript=eq;prot=eq;pid=MDP0000948929;tid=MDP0000948929;contig=MDC003768.152 + 13 No
MD16G004080 mdo transcript=eq;prot=eq;pid=MDP0000165526;tid=MDP0000165526;contig=MDC000968.94 + 16 No
ME01497G00010 mes PACid=17970804;RNAname=cassava4.1_008540m;GeneName=cassava4.1_008540m.g;transcript=ne;prot=eq + scaffold01497 No
MT5G038870 mtr Protein kinase 2B, chloroplastic (AHRD V1 ***- O49840); contains Interpro domain(s) IPR001245 Tyrosine protein kinase transcript=eq;prot=eq;pid=Medtr5g038870.1; - 5 No
OS03G07430 osa protein kinase domain containing protein, expressed transcript=eq;prot=eq; - 3 No
OSINDICA_03G06470 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC005329; - Chr03 No
PT08G14550 ptr PACid=17310000;name=POPTR_0008s14740;alias=pt027125m,Pt-APK2.2,fgenesh4_pm.C_LG_VIII000643; transcript=eq;prot=eq;protein_id=17310000; + scaffold_8 No
PT10G09240 ptr PACid=17304831;name=POPTR_0010s10380;alias=pt011945m,Pt-APK2.1,estExt_fgenesh4_pg.C_LG_X0854; transcript=eq;prot=eq;protein_id=17304831; - scaffold_10 No
RC29736G00120 rco name=29736.m002016;gene=29736.t000012;note=29736.t000012;transcript=eq;prot=eq + 29736 No
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