Sub-family  

Parent family
HOM000263
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (3 genes)



The gene family ORTHO006207 has 24 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 24 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G07970 aly name=fgenesh1_pm.C_scaffold_1000665;pid=311885;prot=eq;tid=311885 - scaffold_1 No
AT1G08320 ath bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 1141 Blast hits to 1141 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 49; Plants - 915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).;bZIP transcription factor family protein transcript=eq;prot=eq; - 1 No
BD2G55567 bdi pid=Bradi2g55567.1;tid=Bradi2g55567.1;GeneName=Bradi2g55567;transcript=eq;prot=eq - Bd2 No
BD4G26670 bdi bZIP transcription factor pid=Bradi4g26670.3;tid=Bradi4g26670.3;GeneName=Bradi4g26670;Name=BdbZIP68;transcript=eq;prot=eq - Bd4 No
CP00032G00140 cpa name=evm.TU.supercontig_32.14;pid=evm.TU.supercontig_32.14;prot=eq;transcript=eq - supercontig_32 No
FV2G44040 fve Transcription factor HBP-1b(c38) (similar to) transcript=eq;prot=eq;pid=gene21797 + LG2 No
GM12G09430 gma 12 pid=16286969;transcript=eq;prot=eq;name=Glyma12g09430.1 - Gm12 No
GM12G30990 gma 12 pid=16288470;transcript=eq;prot=eq;name=Glyma12g30990.1 - Gm12 No
ME02973G00110 mes PACid=17983882;RNAname=cassava4.1_006304m;GeneName=cassava4.1_006304m.g;transcript=eq;prot=eq - scaffold02973 No
ME05859G00700 mes PACid=17973556;RNAname=cassava4.1_006319m;GeneName=cassava4.1_006319m.g;transcript=eq;prot=eq - scaffold05859 No
MT2G086420 mtr BZIP transcription factor (AHRD V1 ***- Q93XM6_ARATH); contains Interpro domain(s) IPR011616 bZIP transcription factor, bZIP-1 transcript=eq;prot=eq;pid=Medtr2g086420.1; + 2 No
MT4G053250 mtr Transcription factor TGA6 (AHRD V1 *-*- Q39140); contains Interpro domain(s) IPR011616 bZIP transcription factor, bZIP-1 transcript=eq;prot=eq;pid=Medtr4g053250.1; - 4 No
OS11G05480 osa transcription factor, putative, expressed transcript=eq;prot=eq; - 11 No
OSINDICA_11G03990 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC034193; - Chr11 No
OSINDICA_12G04590 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC032138; - Chr12 No
PT04G20220 ptr PACid=17346346;name=POPTR_0004s21360;alias=pt006337m,eugene3.00660176; transcript=eq;prot=eq;protein_id=17346346; + scaffold_4 No
PT09G16400 ptr PACid=17309528;name=POPTR_0009s16590;alias=pt004470m,gw1.IX.278.1; transcript=eq;prot=eq;protein_id=17309528; + scaffold_9 No
RC30055G00200 rco name=30055.m001550;gene=30055.t000020;note=30055.t000020;transcript=eq;prot=eq - 30055 No
SB05G003240 sbi 5 prot=eq;pid=5056363;tid=5056363 - chr_5 No
TC00G054170 tca RNAname=Tc00_t054170;GeneName=Tc00_g054170;transcript=eq;prot=eq - Tc00 No
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