Sub-family  

Parent family
HOM000072
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO006171 has 24 genes in 15 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 24 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G05710 aly name=Al_scaffold_0180_2;pid=887087;prot=eq;tid=918600 + scaffold_180 No
AL3G14330 aly name=fgenesh1_pm.C_scaffold_3001168;pid=318152;prot=eq;tid=318152 - scaffold_3 No
AT3G13730 ath Encodes a cytochrome P-450 gene that is involved in brassinosteroid biosynthesis, most likely in the conversion step of teasterone (TE) to 3-dehydroteasterone (3DT), and/or 6-deoxoteasterone (6-deoxoTE) to 6-deoxo-3-dehydroteasterone (6-deoxo3DT); or the conversion of cathasterone (CT) to TE, and/or 6-deoxocathasterone (6-deoxoCT) to 6-deoxoTE. Recently, CYP90D1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). Member of the CYP90C CYP450 family. Similar to Cytochrome P450 90C1 (ROT3).;cytochrome P450, family 90, subfamily D, polypeptide 1 transcript=eq;prot=eq; - 3 No
BD2G05980 bdi pid=Bradi2g05980.1;tid=Bradi2g05980.1;GeneName=Bradi2g05980;transcript=eq;prot=eq + Bd2 No
BD2G33050 bdi pid=Bradi2g33050.1;tid=Bradi2g33050.1;GeneName=Bradi2g33050;transcript=eq;prot=eq - Bd2 No
GM07G01280 gma 07 pid=16265759;transcript=eq;prot=eq;name=Glyma07g01280.1 + Gm07 No
GM08G20690 gma 08 pid=16271881;transcript=eq;prot=eq;name=Glyma08g20690.1 + Gm08 No
LJ3G025470 lja prot=eq;transcript=eq;scaffold=CM0355;name=chr3.CM0355.210.nc - chr3 No
ME12525G00790 mes PACid=17976068;RNAname=cassava4.1_006470m;GeneName=cassava4.1_006470m.g;transcript=ne;prot=eq + scaffold12525 No
OS01G10040 osa cytochrome P450, putative, expressed transcript=eq;prot=eq; + 1 No
OS05G11130 osa cytochrome P450, putative, expressed transcript=eq;prot=eq; + 5 No
OSINDICA_01G09130 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000640; + Chr01 No
OSINDICA_05G09360 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC019992; + Chr05 No
PT01G19960 ptr PACid=17305753;name=POPTR_0001s20720;alias=pt038508m,Pt-CYP90.1,estExt_fgenesh4_pg.C_970030; transcript=eq;prot=eq;protein_id=17305753; - scaffold_1 No
PT03G02460 ptr PACid=17336054;name=POPTR_0003s03030;alias=pt023241m; transcript=eq;prot=eq;protein_id=17336054; - scaffold_3 No
RC28694G00230 rco name=28694.m000680;gene=28694.t000023;note=28694.t000023;transcript=eq;prot=eq + 28694 No
SB03G002870 sbi 3 prot=eq;pid=5035072;tid=5035072 - chr_3 No
SB09G006260 sbi 9 prot=eq;pid=5046078;tid=5046078 + chr_9 No
SM00035G00410 smo proteinId=417566;transcriptId=417566;name=fgenesh2_pg.C_scaffold_35000039;transcript=eq;prot=eq + scaffold_35 No
SM00041G01860 smo proteinId=233379;transcriptId=233379;name=fgenesh1_pm.C_scaffold_41000045;transcript=eq;prot=eq - scaffold_41 No
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