Sub-family  

Parent family
HOM001417
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO006095 has 25 genes in 22 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL8G30690 aly name=fgenesh2_kg.8__2414__AT5G64040.1;pid=496598;prot=eq;tid=496598 - scaffold_8 No
AT5G64040 ath Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex.;photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN) transcript=eq;prot=eq; - 5 No
BD4G40780 bdi pid=Bradi4g40780.1;tid=Bradi4g40780.1;GeneName=Bradi4g40780;transcript=eq;prot=eq - Bd4 No
CP00003G03450 cpa name=evm.TU.supercontig_3.345;pid=evm.TU.supercontig_3.345;prot=eq;transcript=eq - supercontig_3 No
CR02G02040 cre name=estExt_fgenesh2_pg.C_70196;pid=186531;prot=eq;tid=186531;transcript=eq + chromosome_2 No
FV0G21020 fve Photosystem I reaction center subunit N, chloroplastic (PSI-N), Precursor (putative) transcript=eq;prot=eq;pid=gene16185 + scf0513168 No
GM04G39370 gma 04 pid=16257265;transcript=eq;prot=eq;name=Glyma04g39370.1 + Gm04 No
GM06G15540 gma 06 pid=16263073;transcript=eq;prot=eq;name=Glyma06g15540.1 - Gm06 No
LJ4G029430 lja prot=eq;transcript=eq;scaffold=CM0680;name=chr4.CM0680.130.nc + chr4 No
ME06948G00670 mes PACid=17973681;RNAname=cassava4.1_017616m;GeneName=cassava4.1_017616m.g;transcript=eq;prot=eq + scaffold06948 No
MRCC299_03G00900 mrcc299 name=estExt_Genewise2Plus.C_Chr_030124;pid=93625;prot=eq;tid=93625;transcript=eq - Chr_03 No
MT3G095540 mtr Photosystem I reaction center subunit N, chloroplastic (AHRD V1 ***- P49107); contains Interpro domain(s) IPR008796 Photosystem I reaction centre subunit N transcript=eq;prot=eq;pid=Medtr3g095540.1; - 3 No
OL06G00230 olu NULL name=eugene.0600010021,prot=none + Chr_6 No
OS12G08770 osa photosystem I reaction center subunit N, chloroplast precursor, putative, expressed transcript=eq;prot=eq; + 12 No
OSINDICA_12G07500 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC032344; + Chr12 No
OT06G00290 ota PSAN_VOLCA Photosystem I reaction centre subunit N, chl (ISS); name=OT06G00290;protein_id=CAL53288.1;prot=eq + chrom06 No
PT05G06230 ptr PACid=17335687;name=POPTR_0005s06420;alias=pt034028m,estExt_Genewise1_v1.C_LG_V2453; transcript=eq;prot=eq;protein_id=17335687; + scaffold_5 No
PT07G03970 ptr PACid=17314516;name=POPTR_0007s04160;alias=pt025935m,estExt_fgenesh4_pm.C_LG_VII0139; transcript=eq;prot=eq;protein_id=17314516; + scaffold_7 No
RC30137G00100 rco name=30137.m000439;gene=30137.t000012;note=30137.t000012;transcript=eq;prot=eq + 30137 No
SM00023G00310 smo proteinId=19706;transcriptId=19706;name=gw1.23.269.1;transcript=eq;prot=eq - scaffold_23 No
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