Sub-family  

Parent family
HOM000065
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (4 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (3 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (3 genes)
ptr
Populus trichocarpa (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family ORTHO005823 has 25 genes in 12 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G09080 aly name=Al_scaffold_0005_869;pid=865390;prot=eq;tid=896903 + scaffold_5 No
AL7G39200 aly name=fgenesh1_pm.C_scaffold_7002792;pid=330565;prot=eq;tid=330565 + scaffold_7 No
AL7G39210 aly name=fgenesh1_pm.C_scaffold_7002793;pid=330566;prot=eq;tid=330566 + scaffold_7 No
AT5G39270 ath expansin-like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio);expansin A22 transcript=eq;prot=eq; - 5 No
AT5G39280 ath member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio);expansin A23 transcript=eq;prot=eq; - 5 No
AT5G39290 ath member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio);expansin A26 transcript=eq;prot=eq; - 5 No
AT5G39300 ath member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio);expansin A25 transcript=eq;prot=eq; - 5 No
CP00014G01660 cpa name=evm.TU.supercontig_14.166;pid=evm.TU.supercontig_14.166;prot=eq;transcript=eq - supercontig_14 No
CP00976G00010 cpa name=evm.TU.supercontig_976.1;pid=evm.TU.supercontig_976.1;prot=eq;transcript=eq - supercontig_976 No
FV6G42760 fve Expansin-A25 (AtEXPA25), Precursor (similar to) transcript=eq;prot=eq;pid=gene04298 - LG6 No
FV6G42770 fve Expansin-A25 (AtEXPA25), Precursor (similar to) transcript=eq;prot=eq;pid=gene04299 - LG6 No
FV6G43870 fve Expansin-A25 (AtEXPA25), Precursor (similar to) transcript=eq;prot=eq;pid=gene04404 + LG6 No
GM08G26540 gma 08 pid=16272545;transcript=eq;prot=eq;name=Glyma08g26540.1 + Gm08 No
GM18G50030 gma 18 pid=16310995;transcript=eq;prot=eq;name=Glyma18g50030.1 + Gm18 No
LJ0G085320 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_028143;name=LjSGA_028143.2 - LjSGA_028143 No
MD00G456600 mdo transcript=eq;prot=eq;pid=MDP0000261103;tid=MDP0000261103;contig=MDC021089.153 - MDC021089.153 No
MD00G514630 mdo transcript=eq;prot=eq;pid=MDP0000420893;tid=MDP0000420893;contig=MDC038793.5 - MDC038793.5 No
MD02G020170 mdo transcript=eq;prot=eq;pid=MDP0000620349;tid=MDP0000620349;contig=MDC007441.708 - 2 No
ME06916G01240 mes PACid=17981877;RNAname=cassava4.1_025791m;GeneName=cassava4.1_025791m.g;transcript=eq;prot=eq + scaffold06916 No
MT7G013120 mtr Alpha-expansin 4 (Fragment) (AHRD V1 *-*- A6YR96_GOSMU); contains Interpro domain(s) IPR002963 Expansin transcript=eq;prot=eq;pid=Medtr7g013120.1; + 7 No
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