Sub-family  

Parent family
HOM001456
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO005793 has 25 genes in 21 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G30540 aly name=Al_scaffold_0004_2967;pid=870804;prot=eq;tid=902317 + scaffold_4 No
AT2G43120 ath RmlC-like cupins superfamily protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: stem, flower; CONTAINS InterPro DOMAIN/s: Pirin, C-terminal (InterPro:IPR008778), Pirin (InterPro:IPR012093), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: pirin (TAIR:AT3G59220.1); Has 7357 Blast hits to 7357 proteins in 1454 species: Archae - 66; Bacteria - 4603; Metazoa - 71; Fungi - 219; Plants - 125; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink).;RmlC-like cupins superfamily protein transcript=eq;prot=eq; + 2 No
BD1G01870 bdi pid=Bradi1g01870.1;tid=Bradi1g01870.1;GeneName=Bradi1g01870;transcript=eq;prot=eq + Bd1 No
CP00090G00510 cpa name=evm.TU.supercontig_90.51;pid=evm.TU.supercontig_90.51;prot=eq;transcript=eq + supercontig_90 No
CR01G13650 cre name=au.g2284_t1;pid=283816;prot=eq;tid=283823;transcript=eq - chromosome_1 No
FV4G09320 fve Pirin-like protein (putative) transcript=eq;prot=eq;pid=gene22488 + LG4 No
GM08G47620 gma 08 pid=16274179;transcript=eq;prot=eq;name=Glyma08g47620.1 - Gm08 No
GM18G53860 gma 18 pid=16311375;transcript=eq;prot=eq;name=Glyma18g53860.1 + Gm18 No
LJ0G056970 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_020740;name=LjSGA_020740.1 - LjSGA_020740 No
ME00749G00010 mes PACid=17961183;RNAname=cassava4.1_012982m;GeneName=cassava4.1_012982m.g;transcript=eq;prot=eq + scaffold00749 No
ME08124G00010 mes PACid=17984506;RNAname=cassava4.1_030510m;GeneName=cassava4.1_030510m.g;transcript=eq;prot=eq + scaffold08124 No
MRCC299_08G03420 mrcc299 name=EuGene.0800010337;pid=60769;prot=eq;tid=60769;transcript=eq - Chr_08 No
OL09G02420 olu NULL name=e_gwEuk.9.354.1,pid=34904,prot=eq,tid=34904 + Chr_9 No
OS03G62790 osa pirin, putative, expressed transcript=eq;prot=eq; - 3 No
OSINDICA_03G59860 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC008939; - Chr03 No
OT09G02580 ota Pirin (ISS); name=OT09G02580;protein_id=CAL55417.1;prot=eq + chrom09 No
PP00084G01000 ppa NULL name=e_gw1.84.152.1,pid=130782,prot=eq,tid=130782 + scaffold_84 No
PT02G22910 ptr PACid=17338099;name=POPTR_0002s23290;alias=pt021007m,Pt-PRN.2,estExt_fgenesh4_pm.C_LG_II1011; transcript=eq;prot=eq;protein_id=17338099; - scaffold_2 No
PT14G14590 ptr PACid=17302936;name=POPTR_0014s14780;alias=pt035835m,eugene3.00140976,Pt-PRN.1; transcript=eq;prot=eq;protein_id=17302936; + scaffold_14 No
RC30149G00010 rco name=30149.m000229;gene=30149.t000001;note=30149.t000001;transcript=eq;prot=eq + 30149 No
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