Sub-family  

Parent family
HOM001756
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO005760 has 25 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G15850 aly name=fgenesh2_kg.4__1092__AT2G31060.2;pid=482032;prot=eq;tid=482032 - scaffold_4 No
AT2G31060 ath elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2).;elongation factor family protein transcript=eq;prot=eq; - 2 No
BD2G50050 bdi GTPase activity (Blast2GO) pid=Bradi2g50050.1;tid=Bradi2g50050.1;GeneName=Bradi2g50050;transcript=eq;prot=eq + Bd2 No
CP00050G00010 cpa name=evm.TU.supercontig_50.1;pid=evm.TU.supercontig_50.1;prot=eq;transcript=eq + supercontig_50 No
CR13G08880 cre name=e_gwH.44.48.1;pid=106481;prot=eq;tid=106481;transcript=eq - chromosome_13 No
FV6G22260 fve GTP-binding protein typA/bipA homolog (probable) transcript=eq;prot=eq;pid=gene17786 - LG6 No
GM06G43820 gma 06 pid=16265088;transcript=eq;prot=eq;name=Glyma06g43820.1 + Gm06 No
GM12G14080 gma 12 pid=16287428;transcript=eq;prot=eq;name=Glyma12g14080.1 - Gm12 No
MD09G027770 mdo transcript=eq;prot=eq;pid=MDP0000252389;tid=MDP0000252389;contig=MDC013028.347 + 9 No
ME06918G00140 mes PACid=17971079;RNAname=cassava4.1_003058m;GeneName=cassava4.1_003058m.g;transcript=eq;prot=eq + scaffold06918 No
MRCC299_06G05670 mrcc299 name=EuGene.0600010579;pid=59577;prot=eq;tid=59577;transcript=eq + Chr_06 No
MT4G079360 mtr GTP-binding protein TypA/BipA homolog (AHRD V1 **** P57508); contains Interpro domain(s) IPR006298 GTP-binding protein TypA transcript=eq;prot=eq;pid=Medtr4g079360.1; - 4 No
OL13G02900 olu NULL name=fgenesh1_pm.C_Chr_13000069,pid=13224,prot=eq,tid=13224 - Chr_13 No
OL21G00100 olu NULL name=e_gwEuk.21.51.1,pid=36776,prot=eq,tid=36776 + Chr_21 No
OS01G54910 osa GTP%2Dbinding protein typA%2FbipA, putative, expressed transcript=eq;prot=eq; + 1 No
OSINDICA_01G51790 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC003449; + Chr01 No
OT13G03120 ota putative GTPase (ISS); name=OT13G03120;protein_id=CAL56640.1;prot=eq - chrom13 No
PP00132G00600 ppa NULL name=estExt_Genewise1.C_1320063,pid=216713,prot=eq,tid=216713 - scaffold_132 No
PT13G12180 ptr PACid=17305683;name=POPTR_0013s12750;alias=pt030423m; transcript=eq;prot=eq;protein_id=17305683; - scaffold_13 No
RC29646G00620 rco name=29646.m001114;gene=29646.t000062;note=29646.t000062;transcript=eq;prot=eq + 29646 No
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