Sub-family  

Parent family
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO005661 has 25 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G05630 aly name=scaffold_300625.1;pid=896655;prot=eq;tid=928168 - scaffold_3 No
AT3G05680 ath embryo defective 2016 (EMB2016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown.;embryo defective 2016 transcript=eq;prot=eq; - 3 No
BD1G41947 bdi pid=Bradi1g41947.1;tid=Bradi1g41947.1;GeneName=Bradi1g41947;transcript=eq;prot=eq + Bd1 No
CP00104G00160 cpa name=evm.TU.supercontig_104.16;pid=evm.TU.supercontig_104.16;prot=eq;transcript=eq + supercontig_104 No
FV6G29050 fve Protein virilizer (probable) transcript=eq;prot=eq;pid=gene18305 + LG6 No
GM02G35260 gma 02 pid=16249122;transcript=eq;prot=eq;name=Glyma02g35260.1 + Gm02 No
GM10G10160 gma 10 pid=16279138;transcript=eq;prot=eq;name=Glyma10g10160.1 - Gm10 No
GM12G18250 gma 12 pid=16287808;transcript=eq;prot=eq;name=Glyma12g18250.1 - Gm12 No
LJ5G011580 lja partial;prot=eq;transcript=eq;scaffold=CM0571;name=chr5.CM0571.240.nd + chr5 No
LJ5G011590 lja partial;prot=eq;transcript=eq;scaffold=CM0571;name=chr5.CM0571.250.nd + chr5 No
LJ5G011700 lja prot=eq;transcript=eq;scaffold=CM0571;name=chr5.CM0571.360.nd - chr5 No
MD12G003640 mdo transcript=eq;prot=eq;pid=MDP0000299377;tid=MDP0000299377;contig=MDC011779.270 - 12 No
ME02892G00720 mes PACid=17992358;RNAname=cassava4.1_000056m;GeneName=cassava4.1_000056m.g;transcript=eq;prot=eq + scaffold02892 No
OS03G35340 osa expressed protein transcript=eq;prot=eq; - 3 No
OSINDICA_03G32950 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC007145; - Chr03 No
PP00100G00390 ppa NULL name=estExt_fgenesh1_pg.C_1000045,pid=165952,prot=eq,tid=165952 + scaffold_100 No
PT16G06770 ptr PACid=17325587;name=POPTR_0016s06960;alias=pt002845m,fgenesh4_pg.C_LG_XVI000567; transcript=eq;prot=eq;protein_id=17325587; + scaffold_16 No
PT16G06780 ptr PACid=17316386;name=POPTR_0016s06970;alias=pt002654m,fgenesh4_pg.C_LG_XVI000568; transcript=eq;prot=eq;protein_id=17316386; + scaffold_16 No
PT16G06790 ptr PACid=17303052;name=POPTR_0016s06980;alias=pt002689m,estExt_fgenesh4_pg.C_LG_XVI0563; transcript=eq;prot=eq;protein_id=17303052; + scaffold_16 No
RC29333G00100 rco name=29333.m001048;gene=29333.t000011;note=29333.t000011;transcript=eq;prot=eq - 29333 No
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