Sub-family  

Parent family
HOM000069
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family ORTHO005579 has 25 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G46150 aly name=fgenesh1_pm.C_scaffold_1003283;pid=314503;prot=eq;tid=314503 + scaffold_1 No
AL6G19700 aly name=fgenesh2_kg.6__1967__AT5G19440.1;pid=488833;prot=eq;tid=488833 + scaffold_6 No
AT1G51410 ath similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase;NAD(P)-binding Rossmann-fold superfamily protein transcript=eq;prot=eq; + 1 No
AT5G19440 ath similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase;NAD(P)-binding Rossmann-fold superfamily protein transcript=eq;prot=eq; + 5 No
BD2G13450 bdi Cinnamoyl-CoA reductase (CCR) pid=Bradi2g13450.1;tid=Bradi2g13450.1;GeneName=Bradi2g13450;transcript=eq;prot=eq - Bd2 No
GM18G10260 gma 18 pid=16308470;transcript=eq;prot=eq;name=Glyma18g10260.1 + Gm18 No
GM18G10270 gma 18 pid=16308471;transcript=eq;prot=eq;name=Glyma18g10270.1 + Gm18 No
LJ0G422440 lja prot=eq;transcript=eq;scaffold=LjT48C16;name=LjT48C16.160.nd - chr0 No
MD00G005430 mdo transcript=eq;prot=eq;pid=MDP0000265073;tid=MDP0000265073;contig=MDC000197.152 + MDC000197.152 No
MD00G012580 mdo transcript=eq;prot=eq;pid=MDP0000157209;tid=MDP0000157209;contig=MDC000516.523 + MDC000516.523 No
MD00G476340 mdo transcript=eq;prot=eq;pid=MDP0000729984;tid=MDP0000729984;contig=MDC022174.174 - MDC022174.174 No
MD03G015320 mdo transcript=eq;prot=eq;pid=MDP0000204525;tid=MDP0000204525;contig=MDC012112.258 + 3 No
ME10963G00220 mes PACid=17971269;RNAname=cassava4.1_008841m;GeneName=cassava4.1_008841m.g;transcript=eq;prot=eq + scaffold10963 No
MT3G005170 mtr Dihydroflavonol-4-reductase (AHRD V1 **** P51104); contains Interpro domain(s) IPR016040 NAD(P)-binding domain transcript=eq;prot=eq;pid=Medtr3g005170.1; + 3 No
MT3G005210 mtr Dihydroflavonol-4-reductase (AHRD V1 **** P51104); contains Interpro domain(s) IPR016040 NAD(P)-binding domain transcript=eq;prot=eq;pid=Medtr3g005210.1; + 3 No
OS01G34480 osa NAD dependent epimerase%2Fdehydratase family protein, putative, expressed transcript=eq;prot=eq; + 1 No
OSINDICA_01G32220 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC002101; + Chr01 No
PT01G25600 ptr PACid=17323177;name=POPTR_0001s26360;alias=pt039322m,estExt_fgenesh4_pg.C_LG_I1820,CCRL5; transcript=eq;prot=eq;protein_id=17323177; + scaffold_1 No
PT09G05480 ptr PACid=17324792;name=POPTR_0009s05670;alias=pt004830m,estExt_fgenesh4_pg.C_LG_IX1058,CCRL4; transcript=eq;prot=eq;protein_id=17324792; + scaffold_9 No
RC30169G02290 rco name=30169.m006459;gene=30169.t000236;note=30169.t000236;transcript=eq;prot=eq - 30169 No
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