Sub-family  

Parent family
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO005568 has 25 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G39780 aly name=fgenesh1_pg.C_scaffold_1003370;pid=336805;prot=eq;tid=336805 + scaffold_1 No
AT1G45110 ath Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0011, conserved site (InterPro:IPR018063), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uncharacterised protein family UPF0011 (InterPro:IPR008189); Has 8880 Blast hits to 8878 proteins in 2458 species: Archae - 59; Bacteria - 5736; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 2997 (source: NCBI BLink).;Tetrapyrrole (Corrin/Porphyrin) Methylases transcript=eq;prot=eq; + 1 No
BD3G26680 bdi pid=Bradi3g26680.1;tid=Bradi3g26680.1;GeneName=Bradi3g26680;transcript=eq;prot=eq - Bd3 No
CP00099G00150 cpa name=evm.TU.supercontig_99.15;pid=evm.TU.supercontig_99.15;prot=eq;transcript=eq - supercontig_99 No
CR13G02090 cre name=estExt_gwp_1H.C_20004;pid=127404;prot=eq;tid=127404;transcript=eq - chromosome_13 No
FV2G50320 fve Ubiquitin-conjugating enzyme 15 (similar to) transcript=eq;prot=eq;pid=gene15203 - LG2 No
GM06G03190 gma 06 pid=16261540;transcript=eq;prot=eq;name=Glyma06g03190.1 - Gm06 No
MD00G413450 mdo transcript=eq;prot=eq;pid=MDP0000214917;tid=MDP0000214917;contig=MDC018827.586 + MDC018827.586 No
MD08G001510 mdo transcript=eq;prot=eq;pid=MDP0000174759;tid=MDP0000174759;contig=MDC003445.193 - 8 No
MD15G033210 mdo transcript=eq;prot=eq;pid=MDP0000158302;tid=MDP0000158302;contig=MDC000836.210 + 15 No
ME09657G00100 mes PACid=17969665;RNAname=cassava4.1_029282m;GeneName=cassava4.1_029282m.g;transcript=eq;prot=eq + scaffold09657 No
MRCC299_08G00930 mrcc299 name=fgenesh2_pg.C_Chr_08000061;pid=101770;prot=eq;tid=101770;transcript=eq + Chr_08 No
OL20G00640 olu NULL name=gwEuk.20.250.1,pid=6302,prot=eq,tid=6302 + Chr_20 No
OS10G27450 osa tetrapyrrole methylase family protein, putative, expressed transcript=eq;prot=eq; - 10 No
OSINDICA_10G18570 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC030802; - Chr10 No
OT14G00750 ota tetrapyrrole methylase family protein (ISS); name=OT14G00750;protein_id=CAL56821.1;prot=eq + chrom14 No
PP00010G00330 ppa NULL name=e_gw1.10.89.1,pid=114356,prot=eq,tid=114356 - scaffold_10 No
PT05G24230 ptr PACid=17338848;name=POPTR_0005s25370;alias=pt033638m; transcript=eq;prot=eq;protein_id=17338848; + scaffold_5 No
RC30170G04570 rco name=30170.m014101;gene=30170.t000513;note=30170.t000513;transcript=eq;prot=eq + 30170 No
SB01G022060 sbi 1 prot=eq;pid=5048863;tid=5048863 + chr_1 No
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