Sub-family  

Parent family
HOM000125
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (2 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO005502 has 25 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G16680 aly name=fgenesh2_kg.1__1735__AT1G15820.1;pid=471781;prot=eq;tid=471781 - scaffold_1 No
AT1G15820 ath Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.;light harvesting complex photosystem II subunit 6 transcript=eq;prot=eq; - 1 No
BD5G12150 bdi pid=Bradi5g12150.1;tid=Bradi5g12150.1;GeneName=Bradi5g12150;transcript=eq;prot=eq - Bd5 No
CP00042G00860 cpa name=evm.TU.supercontig_42.86;pid=evm.TU.supercontig_42.86;prot=eq;transcript=eq - supercontig_42 No
FV5G41820 fve Chlorophyll a-b binding protein CP24 10A, chloroplastic (CAB-10A), Precursor (putative) transcript=eq;prot=eq;pid=gene16097 + LG5 No
GM05G24660 gma 05 pid=16259494;transcript=eq;prot=eq;name=Glyma05g24660.1 - Gm05 No
GM08G07880 gma 08 pid=16270346;transcript=eq;prot=eq;name=Glyma08g07880.1 - Gm08 No
GM08G19210 gma 08 pid=16271699;transcript=eq;prot=eq;name=Glyma08g19210.1 - Gm08 No
GM15G05790 gma 15 pid=16297772;transcript=eq;prot=eq;name=Glyma15g05790.1 + Gm15 No
LJ6G019140 lja prot=eq;transcript=eq;scaffold=CM0314;name=chr6.CM0314.310.nc - chr6 No
MD02G008160 mdo transcript=eq;prot=eq;pid=MDP0000327940;tid=MDP0000327940;contig=MDC001313.262 + 2 No
ME08003G00100 mes PACid=17967970;RNAname=cassava4.1_013632m;GeneName=cassava4.1_013632m.g;transcript=eq;prot=eq - scaffold08003 No
MT2G008610 mtr Chloroplast chlorophyll a/b-binding protein CP24 (Fragment) (AHRD V1 *-*- Q5BMR6_FRAAN); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein transcript=eq;prot=eq;pid=Medtr2g008610.1; + 2 No
OS04G38410 osa chlorophyll A%2DB binding protein, putative, expressed transcript=eq;prot=eq; - 4 No
OSINDICA_04G29930 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC017745; - Chr04 No
OSINDICA_04G29960 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC017747; - Chr04 No
PP00028G01590 ppa NULL name=e_gw1.28.264.1,pid=119427,prot=eq,tid=119427 - scaffold_28 No
PP00028G01620 ppa NULL name=fgenesh1_pm.scaffold_28000049,pid=56132,prot=eq,tid=56132 + scaffold_28 No
PT01G20980 ptr PACid=17345494;name=POPTR_0001s21740;alias=pt039781m,estExt_Genewise1_v1.C_LG_I9864,Pt-LHCB6.2,Lhcb6-1; transcript=eq;prot=eq;protein_id=17345494; - scaffold_1 No
PT03G00880 ptr PACid=17314566;name=POPTR_0003s01450;alias=pt023614m; transcript=eq;prot=eq;protein_id=17314566; + scaffold_3 No
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