Sub-family  

Parent family
HOM004612
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO005481 has 25 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G10850 aly name=fgenesh2_kg.1__1160__AT1G10740.1;pid=471206;prot=eq;tid=471206 - scaffold_1 No
AL1G25170 aly name=fgenesh2_kg.1__2546__AT1G23330.1;pid=472592;prot=eq;tid=472592 - scaffold_1 No
AT1G10740 ath alpha/beta-Hydrolases superfamily protein; INVOLVED IN: glycerol biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G23330.1); Has 782 Blast hits to 782 proteins in 229 species: Archae - 0; Bacteria - 631; Metazoa - 3; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 1 No
AT1G23330 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G10740.4); Has 777 Blast hits to 777 proteins in 229 species: Archae - 0; Bacteria - 631; Metazoa - 3; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 1 No
BD2G25570 bdi pid=Bradi2g25570.1;tid=Bradi2g25570.1;GeneName=Bradi2g25570;transcript=eq;prot=eq + Bd2 No
CP00069G00930 cpa name=evm.TU.supercontig_69.93;pid=evm.TU.supercontig_69.93;prot=eq;transcript=eq + supercontig_69 No
FV0G00090 fve Lipase 46 kDa form, Precursor (probable) transcript=eq;prot=eq;pid=gene03585 + scf0513158 No
GM02G04250 gma 02 pid=16246934;transcript=eq;prot=eq;name=Glyma02g04250.1 + Gm02 No
LJ2G018640 lja prot=eq;transcript=eq;scaffold=CM0008;name=chr2.CM0008.550.nc + chr2 No
MD13G007140 mdo transcript=eq;prot=eq;pid=MDP0000310222;tid=MDP0000310222;contig=MDC022252.142 + 13 No
MD16G005580 mdo transcript=eq;prot=eq;pid=MDP0000143011;tid=MDP0000143011;contig=MDC025815.15 + 16 No
ME04175G00040 mes PACid=17963384;RNAname=cassava4.1_007053m;GeneName=cassava4.1_007053m.g;transcript=eq;prot=eq + scaffold04175 No
ME12211G00060 mes PACid=17986459;RNAname=cassava4.1_007050m;GeneName=cassava4.1_007050m.g;transcript=eq;prot=eq + scaffold12211 No
MT5G033590 mtr Lipase (AHRD V1 ***- B6UAB9_MAIZE) transcript=eq;prot=eq;pid=Medtr5g033590.1; - 5 No
OS05G33820 osa lipase, putative, expressed transcript=eq;prot=eq; - 5 No
OSINDICA_05G30230 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC021191; - Chr05 No
PP00028G02030 ppa NULL name=estExt_gwp_gw1.C_280305,pid=178181,prot=eq,tid=178181 + scaffold_28 No
PT08G19020 ptr PACid=17303278;name=POPTR_0008s19210;alias=pt026971m; transcript=eq;prot=eq;protein_id=17303278; - scaffold_8 No
PT10G04300 ptr PACid=17302490;name=POPTR_0010s05440;alias=pt011778m,gw1.X.5268.1; transcript=eq;prot=eq;protein_id=17302490; + scaffold_10 No
RC27504G00130 rco name=27504.m000621;gene=27504.t000013;note=27504.t000013;transcript=eq;prot=eq + 27504 No
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