Sub-family  

Parent family
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family ORTHO005479 has 25 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G09630 aly name=fgenesh1_pm.C_scaffold_1000810;pid=312030;prot=eq;tid=312030 + scaffold_1 No
AT1G09870 ath histidine acid phosphatase family protein; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Histidine acid phosphatase, eukaryotic (InterPro:IPR016274); Has 765 Blast hits to 755 proteins in 231 species: Archae - 0; Bacteria - 126; Metazoa - 192; Fungi - 356; Plants - 52; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).;histidine acid phosphatase family protein transcript=eq;prot=eq; + 1 No
BD1G03920 bdi inositol or phosphatidylinositol phosphatase activity, acid phosphatase activity (Blast2GO) pid=Bradi1g03920.1;tid=Bradi1g03920.1;GeneName=Bradi1g03920;transcript=eq;prot=eq - Bd1 No
CP00019G01350 cpa name=evm.TU.supercontig_19.135;pid=evm.TU.supercontig_19.135;prot=eq;transcript=eq + supercontig_19 No
FV7G30110 fve Multiple inositol polyphosphate phosphatase 1, Precursor (probable) transcript=eq;prot=eq;pid=gene21033 - LG7 No
GM05G13870 gma 05 pid=16258910;transcript=eq;prot=eq;name=Glyma05g13870.1 - Gm05 No
GM18G02810 gma 18 pid=16307736;transcript=eq;prot=eq;name=Glyma18g02810.1 + Gm18 No
LJ0G158340 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_049644;name=LjSGA_049644.1 + LjSGA_049644 No
ME05009G00030 mes PACid=17964107;RNAname=cassava4.1_006792m;GeneName=cassava4.1_006792m.g;transcript=eq;prot=eq - scaffold05009 No
ME10689G00480 mes PACid=17983198;RNAname=cassava4.1_006168m;GeneName=cassava4.1_006168m.g;transcript=eq;prot=eq + scaffold10689 No
MT3G071580 mtr Multiple inositol polyphosphate phosphatase 1 (AHRD V1 *-*- Q9UNW1); contains Interpro domain(s) IPR000560 Histidine acid phosphatase transcript=eq;prot=eq;pid=Medtr3g071580.1; - 3 No
OS03G60370 osa histidine acid phosphatase, putative, expressed transcript=eq;prot=eq; + 3 No
OSINDICA_03G57610 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC008761; + Chr03 No
PP00073G00200 ppa NULL name=e_gw1.73.39.1,pid=129025,prot=eq,tid=129025 - scaffold_73 No
PP00363G00140 ppa NULL name=estExt_gwp_gw1.C_3630026,pid=199305,prot=eq,tid=199305 - scaffold_363 No
PT08G07070 ptr PACid=17306692;name=POPTR_0008s07260;alias=pt026920m,fgenesh4_pg.C_LG_VIII000629; transcript=eq;prot=eq;protein_id=17306692; - scaffold_8 No
PT10G18060 ptr PACid=17330087;name=POPTR_0010s19200;alias=pt011702m,estExt_fgenesh4_pm.C_LG_X0716; transcript=eq;prot=eq;protein_id=17330087; + scaffold_10 No
RC29729G00090 rco name=29729.m002276;gene=29729.t000009;note=29729.t000009;transcript=eq;prot=eq - 29729 No
SB01G003490 sbi 1 prot=eq;pid=5047847;tid=5047847 - chr_1 No
SM00064G01230 smo proteinId=181288;transcriptId=181288;name=estExt_Genewise1Plus.C_640184;transcript=eq;prot=eq - scaffold_64 No
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