Sub-family  

Parent family
HOM000288
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO005459 has 25 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G03980 aly name=scaffold_100422.1;pid=887628;prot=eq;tid=919141 - scaffold_1 No
AT1G04570 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G33280.1); Has 816 Blast hits to 814 proteins in 271 species: Archae - 6; Bacteria - 387; Metazoa - 0; Fungi - 18; Plants - 232; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; - 1 No
BD1G29040 bdi pid=Bradi1g29040.1;tid=Bradi1g29040.1;GeneName=Bradi1g29040;transcript=eq;prot=eq + Bd1 No
CP00059G00260 cpa name=evm.TU.supercontig_59.26;pid=evm.TU.supercontig_59.26;prot=eq;transcript=eq - supercontig_59 No
FV0G37670 fve Gibberellin 2-beta-dioxygenase (probable) transcript=eq;prot=eq;pid=gene28300 - scf0513124 No
GM04G13920 gma 04 pid=16255843;transcript=eq;prot=eq;name=Glyma04g13920.1 - Gm04 No
GM06G47610 gma 06 pid=16265501;transcript=eq;prot=eq;name=Glyma06g47610.1 + Gm06 No
LJ0G017340 lja prot=eq;transcript=eq;scaffold=LjSGA_010639;name=LjSGA_010639.1 - LjSGA_010639 No
MD00G443970 mdo transcript=eq;prot=eq;pid=MDP0000921426;tid=MDP0000921426;contig=MDC020362.335 + MDC020362.335 No
ME01551G00330 mes PACid=17962174;RNAname=cassava4.1_026445m;GeneName=cassava4.1_026445m.g;transcript=eq;prot=eq + scaffold01551 No
ME10563G01970 mes PACid=17993479;RNAname=cassava4.1_004957m;GeneName=cassava4.1_004957m.g;transcript=eq;prot=eq - scaffold10563 No
MT3G008470 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004324 Biopterin transport-related protein BT1 transcript=eq;prot=eq;pid=Medtr3g008470.1; + 3 No
OS07G24230 osa integral membrane transporter family protein, putative, expressed transcript=eq;prot=eq; - 7 No
OSINDICA_09G09170 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC028134; + Chr09 No
PP00019G01670 ppa NULL name=e_gw1.19.70.1,pid=117275,prot=eq,tid=117275 - scaffold_19 No
PP00028G00490 ppa NULL name=gw1.28.338.1,pid=43845,prot=eq,tid=43845 - scaffold_28 No
PP00230G00320 ppa NULL name=estExt_Genewise1.C_2300023,pid=222325,prot=eq,tid=222325 + scaffold_230 No
PT08G17180 ptr PACid=17313006;name=POPTR_0008s17370;alias=pt026809m; transcript=eq;prot=eq;protein_id=17313006; - scaffold_8 No
PT10G06290 ptr PACid=17313432;name=POPTR_0010s07430;alias=pt011529m; transcript=eq;prot=eq;protein_id=17313432; + scaffold_10 No
RC29904G01690 rco name=29904.m003058;gene=29904.t000172;note=29904.t000172;transcript=eq;prot=eq + 29904 No
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