Sub-family  

Parent family
HOM001340
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (3 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (2 genes)



The gene family ORTHO005332 has 26 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G29940 aly name=scaffold_703177.1;pid=915435;prot=eq;tid=946948 + scaffold_7 No
AT4G14385 ath FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). transcript=eq;prot=eq; - 4 No
BD3G52820 bdi pid=Bradi3g52820.1;tid=Bradi3g52820.1;GeneName=Bradi3g52820;transcript=eq;prot=eq + Bd3 No
CP00050G00230 cpa name=evm.TU.supercontig_50.23;pid=evm.TU.supercontig_50.23;prot=eq;transcript=eq - supercontig_50 No
CR06G08930 cre name=kg.chromosome_6_#_2034_#_XP_001695403.1;pid=307763;prot=eq;tid=307770;transcript=eq + chromosome_6 No
GM10G04240 gma 10 pid=16278531;transcript=eq;prot=eq;name=Glyma10g04240.1 - Gm10 No
GM13G18430 gma 13 pid=16290719;transcript=eq;prot=eq;name=Glyma13g18430.1 - Gm13 No
LJ5G018570 lja partial;prot=eq;transcript=eq;scaffold=CM0299;name=chr5.CM0299.330.nc + chr5 No
ME06715G00080 mes PACid=17982255;RNAname=cassava4.1_030717m;GeneName=cassava4.1_030717m.g;transcript=eq;prot=eq - scaffold06715 No
ME09880G00260 mes PACid=17968380;RNAname=cassava4.1_018123m;GeneName=cassava4.1_018123m.g;transcript=eq;prot=eq + scaffold09880 No
ME10563G01210 mes PACid=17993356;RNAname=cassava4.1_018036m;GeneName=cassava4.1_018036m.g;transcript=eq;prot=eq + scaffold10563 No
MRCC299_14G01290 mrcc299 name=gw2.14.400.1;pid=74109;prot=eq;tid=74109;transcript=eq - Chr_14 No
OL09G01380 olu NULL name=eugene.0900010141,pid=33437,prot=eq,tid=33437 - Chr_9 No
OS01G13250 osa sarcoma antigen NY%2DSAR%2D91, putative, expressed transcript=eq;prot=eq; + 1 No
OS12G20310 osa sarcoma antigen NY%2DSAR%2D91, putative, expressed transcript=eq;prot=eq; + 12 No
OSINDICA_01G12480 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000885; + Chr01 No
PP00178G00430 ppa NULL name=e_gw1.178.46.1,pid=141449,prot=eq,tid=141449 + scaffold_178 No
PP00363G00250 ppa NULL name=estExt_gwp_gw1.C_3630035,pid=199311,prot=eq,tid=199311 + scaffold_363 No
PT02G03790 ptr PACid=17332396;name=POPTR_0002s03980;alias=pt021751m,estExt_Genewise1_v1.C_LG_II2140; transcript=eq;prot=eq;protein_id=17332396; - scaffold_2 No
PT05G23390 ptr PACid=17314021;name=POPTR_0005s24530;alias=pt034069m; transcript=eq;prot=eq;protein_id=17314021; + scaffold_5 No
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