Sub-family  

Parent family
HOM001424
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (5 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO005292 has 26 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G06650 aly name=fgenesh2_kg.7__666__AT4G34320.1;pid=491233;prot=eq;tid=491233 - scaffold_7 No
AT4G34320 ath Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, sepal, flower, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT4G34330.1); Has 254 Blast hits to 251 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 246; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).;Protein of unknown function (DUF677) transcript=eq;prot=eq; + 4 No
BD1G71240 bdi pid=Bradi1g71240.1;tid=Bradi1g71240.1;GeneName=Bradi1g71240;transcript=eq;prot=eq - Bd1 No
CP00062G01060 cpa name=evm.TU.supercontig_62.107;pid=evm.TU.supercontig_62.107;prot=eq;transcript=eq - supercontig_62 No
FV2G00230 fve UPF0496 protein At4g34320 (putative) transcript=eq;prot=eq;pid=gene02168 - LG2 No
GM11G12820 gma 11 pid=16283679;transcript=eq;prot=eq;name=Glyma11g12820.1 + Gm11 No
GM12G04970 gma 12 pid=16286436;transcript=eq;prot=eq;name=Glyma12g04970.1 + Gm12 No
LJ3G032910 lja prot=eq;transcript=eq;scaffold=CM0091;name=chr3.CM0091.400.nc - chr3 No
MD00G480880 mdo transcript=eq;prot=eq;pid=MDP0000902543;tid=MDP0000902543;contig=MDC022429.118 - MDC022429.118 No
ME04740G00190 mes PACid=17977783;RNAname=cassava4.1_009905m;GeneName=cassava4.1_009905m.g;transcript=ne;prot=eq - scaffold04740 No
ME08799G00060 mes PACid=17984669;RNAname=cassava4.1_021932m;GeneName=cassava4.1_021932m.g;transcript=eq;prot=eq + scaffold08799 No
OS03G10240 osa DUF677 domain containing protein, putative, expressed transcript=eq;prot=eq; + 3 No
OSINDICA_03G08750 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC037584; + Chr03 No
PT04G14850 ptr PACid=17317070;name=POPTR_0004s15800;alias=pt006715m,gw1.IV.409.1; transcript=eq;prot=eq;protein_id=17317070; - scaffold_4 No
PT09G11360 ptr PACid=17335509;name=POPTR_0009s11550;alias=pt004710m,fgenesh4_pm.C_LG_IX000270; transcript=eq;prot=eq;protein_id=17335509; - scaffold_9 No
RC29851G00870 rco name=29851.m002447;gene=29851.t000089;note=29851.t000089;transcript=eq;prot=eq + 29851 No
SB01G043880 sbi 1 prot=eq;pid=5049993;tid=5049993 - chr_1 No
SM00000G00810 smo proteinId=74185;transcriptId=74185;name=e_gw1.0.2410.1;transcript=eq;prot=eq - scaffold_0 No
SM00000G00840 smo proteinId=74510;transcriptId=74510;name=e_gw1.0.656.1;transcript=eq;prot=eq + scaffold_0 No
SM00000G05540 smo proteinId=402496;transcriptId=402496;name=fgenesh2_pg.C_scaffold_0000501;transcript=eq;prot=eq - scaffold_0 No
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