Sub-family  

Parent family
HOM000019
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family ORTHO005262 has 26 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G32230 aly name=scaffold_603335.1;pid=911278;prot=eq;tid=942791 - scaffold_6 No
AT1G33770 ath Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G10010.1); Has 124552 Blast hits to 123113 proteins in 4549 species: Archae - 90; Bacteria - 13991; Metazoa - 46983; Fungi - 12898; Plants - 30124; Viruses - 424; Other Eukaryotes - 20042 (source: NCBI BLink).;Protein kinase superfamily protein transcript=eq;prot=eq; + 1 No
AT1G71530 ath Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G33770.1); Has 124162 Blast hits to 122846 proteins in 4565 species: Archae - 95; Bacteria - 14009; Metazoa - 46727; Fungi - 12540; Plants - 30579; Viruses - 427; Other Eukaryotes - 19785 (source: NCBI BLink).;Protein kinase superfamily protein transcript=eq;prot=eq; + 1 No
AT4G10010 ath Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G33770.1); Has 116672 Blast hits to 115652 proteins in 4421 species: Archae - 83; Bacteria - 13163; Metazoa - 44283; Fungi - 12132; Plants - 27758; Viruses - 447; Other Eukaryotes - 18806 (source: NCBI BLink).;Protein kinase superfamily protein transcript=eq;prot=eq; - 4 No
BD3G46007 bdi pid=Bradi3g46007.1;tid=Bradi3g46007.1;GeneName=Bradi3g46007;transcript=eq;prot=eq + Bd3 No
CP00021G00610 cpa name=evm.TU.supercontig_21.61;pid=evm.TU.supercontig_21.61;prot=eq;transcript=eq - supercontig_21 No
CP00113G00190 cpa name=evm.TU.supercontig_113.19;pid=evm.TU.supercontig_113.19;prot=eq;transcript=eq + supercontig_113 No
FV5G24740 fve Probable serine/threonine-protein kinase At1g54610 (similar to) transcript=eq;prot=eq;pid=gene27065 + LG5 No
GM11G01740 gma 11 pid=16282338;transcript=eq;prot=eq;name=Glyma11g01740.1 + Gm11 No
GM12G28650 gma 12 pid=16288191;transcript=eq;prot=eq;name=Glyma12g28650.1 + Gm12 No
GM16G00320 gma 16 pid=16300956;transcript=eq;prot=eq;name=Glyma16g00320.1 + Gm16 No
LJ2G028820 lja prot=eq;transcript=eq;scaffold=CM0018;name=chr2.CM0018.180.nd - chr2 No
MD00G272770 mdo transcript=eq;prot=eq;pid=MDP0000293264;tid=MDP0000293264;contig=MDC011665.418 + MDC011665.418 No
MD00G290210 mdo transcript=eq;prot=eq;pid=MDP0000295748;tid=MDP0000295748;contig=MDC012392.515 - MDC012392.515 No
MD08G020290 mdo transcript=eq;prot=eq;pid=MDP0000315763;tid=MDP0000315763;contig=MDC022206.381 + 8 No
ME09731G00010 mes PACid=17983441;RNAname=cassava4.1_023884m;GeneName=cassava4.1_023884m.g;transcript=eq;prot=eq - scaffold09731 No
MT5G008860 mtr Os03g0349200 protein (Fragment) (AHRD V1 *--- Q0DRW6_ORYSJ); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase transcript=eq;prot=eq;pid=Medtr5g008860.1; + 5 No
PT04G22410 ptr PACid=17333535;name=POPTR_0004s23550;alias=pt006047m; transcript=eq;prot=eq;protein_id=17333535; - scaffold_4 No
PT19G09060 ptr PACid=17343259;name=POPTR_0019s10200;alias=pt009756m; transcript=eq;prot=eq;protein_id=17343259; - scaffold_19 No
RC29765G00020 rco name=29765.m000720;gene=29765.t000002;note=29765.t000002;transcript=eq;prot=eq + 29765 No
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