Sub-family  

Parent family
HOM004437
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO005218 has 26 genes in 22 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G12110 aly name=fgenesh2_kg.6__1199__AT5G12220.1;pid=488065;prot=eq;tid=488065 + scaffold_6 No
AT5G12220 ath las1-like family protein; CONTAINS InterPro DOMAIN/s: Las1-like (InterPro:IPR007174); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;las1-like family protein transcript=eq;prot=eq; + 5 No
BD2G52830 bdi pid=Bradi2g52830.1;tid=Bradi2g52830.1;GeneName=Bradi2g52830;transcript=eq;prot=eq - Bd2 No
CP00189G00010 cpa name=evm.TU.supercontig_189.1;pid=evm.TU.supercontig_189.1;prot=eq;transcript=eq - supercontig_189 No
CP26789G00020 cpa name=evm.TU.contig_26789.2;pid=evm.TU.contig_26789.2;prot=eq;transcript=eq + contig_26789 No
FV0G34380 fve LAS1-like protein (probable) transcript=eq;prot=eq;pid=gene11793 + scf0513146 No
FV0G34390 fve Dihydroorotate dehydrogenase (DHODase) (probable) transcript=eq;prot=eq;pid=gene11794 + scf0513146 No
GM02G44680 gma 02 pid=16250184;transcript=eq;prot=eq;name=Glyma02g44680.1 - Gm02 No
GM14G04040 gma 14 pid=16294291;transcript=eq;prot=eq;name=Glyma14g04040.1 + Gm14 No
LJ2G036410 lja prot=eq;transcript=eq;scaffold=CM0308;name=chr2.CM0308.140.nd + chr2 No
MD00G421400 mdo transcript=eq;prot=eq;pid=MDP0000218600;tid=MDP0000218600;contig=MDC019242.154 - MDC019242.154 No
ME06916G01030 mes PACid=17981873;RNAname=cassava4.1_004938m;GeneName=cassava4.1_004938m.g;transcript=eq;prot=eq + scaffold06916 No
MRCC299_05G06240 mrcc299 name=fgenesh2_pg.C_Chr_05000418;pid=100725;prot=eq;tid=100725;transcript=eq + Chr_05 No
MT5G089190 mtr Protein LAS1 homolog (AHRD V1 *-*- Q9Y4W2); contains Interpro domain(s) IPR007174 Las1-like transcript=eq;prot=eq;pid=Medtr5g089190.1; - 5 No
OL16G01760 olu NULL name=fgenesh1_pg.C_Chr_16000119,pid=18554,prot=eq,tid=18554 + Chr_16 No
OS12G08800 osa las1%2Dlike family protein, putative, expressed transcript=eq;prot=eq; + 12 No
OSINDICA_12G07520 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC032346; + Chr12 No
OT17G01720 ota Nuclear protein involved in cell morphogenesis and cell surface growth (ISS); name=OT17G01720;protein_id=CAL57899.1;prot=eq + chrom17 No
PT01G27270 ptr PACid=17324612;name=POPTR_0001s28030;alias=pt037840m,fgenesh4_pg.C_LG_I001985; transcript=eq;prot=eq;protein_id=17324612; + scaffold_1 No
PT09G07020 ptr PACid=17343510;name=POPTR_0009s07210;alias=pt004271m,fgenesh4_pm.C_LG_IX000457; transcript=eq;prot=eq;protein_id=17343510; + scaffold_9 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier