Sub-family  

Parent family
HOM000838
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO005116 has 26 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G32870 aly name=fgenesh2_kg.4__2691__AT2G45010.1;pid=483631;prot=eq;tid=483631 + scaffold_4 No
AL8G15630 aly name=fgenesh2_kg.8__1027__AT5G51400.1;pid=495211;prot=eq;tid=495211 - scaffold_8 No
AT2G45010 ath PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G51400.1); Has 558 Blast hits to 557 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 22; Plants - 524; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).;PLAC8 family protein transcript=eq;prot=eq; + 2 No
AT5G51400 ath PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G45010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;PLAC8 family protein transcript=eq;prot=eq; - 5 No
BD1G78450 bdi pid=Bradi1g78450.1;tid=Bradi1g78450.1;GeneName=Bradi1g78450;transcript=eq;prot=eq + Bd1 No
CP00003G03270 cpa name=evm.TU.supercontig_3.327;pid=evm.TU.supercontig_3.327;prot=eq;transcript=eq + supercontig_3 No
FV7G32730 fve Peroxisomal membrane protein 11B (AtPEX11b) (similar to) transcript=eq;prot=eq;pid=gene21210 - LG7 No
GM04G14010 gma 04 pid=16255852;transcript=eq;prot=eq;name=Glyma04g14010.1 - Gm04 No
GM06G47570 gma 06 pid=16265497;transcript=eq;prot=eq;name=Glyma06g47570.1 + Gm06 No
GM09G35820 gma 09 pid=16277328;transcript=eq;prot=eq;name=Glyma09g35820.1 + Gm09 No
GM12G01530 gma 12 pid=16285981;transcript=eq;prot=eq;name=Glyma12g01530.1 - Gm12 No
LJ3G036480 lja prot=eq;transcript=eq;scaffold=CM0127;name=chr3.CM0127.810.nc + chr3 No
MD00G407160 mdo transcript=eq;prot=eq;pid=MDP0000252267;tid=MDP0000252267;contig=MDC018531.168 - MDC018531.168 No
MD01G017090 mdo transcript=eq;prot=eq;pid=MDP0000281095;tid=MDP0000281095;contig=MDC006273.129 - 1 No
ME06701G00470 mes PACid=17985315;RNAname=cassava4.1_015194m;GeneName=cassava4.1_015194m.g;transcript=eq;prot=eq - scaffold06701 No
MT7G044840 mtr cDNA clone 006-202-D11 full insert sequence (AHRD V1 ***- Q10T45_ORYSJ); contains Interpro domain(s) IPR006461 Protein of unknown function Cys-rich transcript=eq;prot=eq;pid=Medtr7g044840.1; - 7 No
OS03G01210 osa uncharacterized Cys%2Drich domain containing protein, putative, expressed transcript=eq;prot=eq; + 3 No
PP00026G01090 ppa NULL name=estExt_Genewise1.C_260162,pid=205311,prot=eq,tid=205311 - scaffold_26 No
PP00059G00020 ppa NULL name=estExt_fgenesh1_pm.C_590002,pid=106041,prot=eq,tid=106041 + scaffold_59 No
PT03G09870 ptr PACid=17320643;name=POPTR_0003s10820;alias=pt023943m,estExt_fgenesh4_kg.C_LG_III0028; transcript=eq;prot=eq;protein_id=17320643; - scaffold_3 No
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