Sub-family  

Parent family
HOM000738
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO004989 has 26 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G12380 aly name=scaffold_301372.1;pid=897402;prot=eq;tid=928915 - scaffold_3 No
AT3G11945 ath Encodes a protein involved in plastoquinone-9 biosynthesis. The enzyme possesses homogentisate prenyltransferase activity and was shown to use solanesyl diphosphate, farnesyl diphosphate and geranylgeranyldiphosphate as prenyl donors, but not phytyldiphosphate. This gene At3g11945 derives from a split of At3g11950, publications Tian et al (2007) and Sadre et al (2006) refer to this gene as At3g11950.;homogentisate prenyltransferase transcript=eq;prot=eq; - 3 No
BD2G18210 bdi pid=Bradi2g18210.3;tid=Bradi2g18210.3;GeneName=Bradi2g18210;transcript=eq;prot=eq - Bd2 No
CP00085G00110 cpa name=evm.TU.supercontig_85.11;pid=evm.TU.supercontig_85.11;prot=eq;transcript=eq + supercontig_85 No
CR06G07380 cre name=e_gwW.26.42.1;pid=118917;prot=eq;tid=118917;transcript=eq + chromosome_6 No
FV6G27930 fve Digeranylgeranylglyceryl phosphate synthase (DGGGP synthase) (probable) transcript=eq;prot=eq;pid=gene18012 - LG6 No
GM02G26820 gma 02 pid=16248641;transcript=eq;prot=eq;name=Glyma02g26820.1 - Gm02 No
GM09G15720 gma 09 pid=16275705;transcript=eq;prot=eq;name=Glyma09g15720.1 + Gm09 No
LJ0G189610 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_060324;name=LjSGA_060324.1 + LjSGA_060324 No
MD00G406000 mdo transcript=eq;prot=eq;pid=MDP0000307091;tid=MDP0000307091;contig=MDC018445.312 + MDC018445.312 No
MD13G027870 mdo transcript=eq;prot=eq;pid=MDP0000132523;tid=MDP0000132523;contig=MDC021964.45 + 13 No
ME08542G00340 mes PACid=17994090;RNAname=cassava4.1_010131m;GeneName=cassava4.1_010131m.g;transcript=eq;prot=eq - scaffold08542 No
MRCC299_04G04980 mrcc299 name=est_cluster_kg.Chr_04__103__3202239:2;pid=108125;prot=eq;tid=108125;transcript=eq + Chr_04 No
OL06G01290 olu NULL name=eugene.0600010128,pid=32069,prot=eq,tid=32069 - Chr_6 No
OS07G38850 osa prenyltransferase, putative transcript=eq;prot=eq; + 7 No
OSINDICA_07G31210 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC024181; + Chr07 No
OT06G01520 ota putative tocopherol polyprenyltransferase (ISS); name=OT06G01520;protein_id=CAL53411.1;prot=eq - chrom06 No
PP00066G00670 ppa NULL name=estExt_gwp_gw1.C_660086,pid=183516,prot=eq,tid=183516 - scaffold_66 No
PT06G19680 ptr PACid=17319898;name=POPTR_0006s21200;alias=pt017935m,estExt_fgenesh4_pg.C_LG_VI1085; transcript=eq;prot=eq;protein_id=17319898; - scaffold_6 No
RC27553G00110 rco name=27553.m000325;gene=27553.t000011;note=27553.t000011;transcript=eq;prot=eq - 27553 No
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