Sub-family  

Parent family
HOM000319
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO004968 has 26 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G05380 aly name=fgenesh1_pm.C_scaffold_3000422;pid=317406;prot=eq;tid=317406 - scaffold_3 No
AT3G05470 ath Actin-binding FH2 (formin homology 2) family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homolog 6 (TAIR:AT5G67470.1); Has 5495 Blast hits to 4819 proteins in 357 species: Archae - 2; Bacteria - 168; Metazoa - 2550; Fungi - 658; Plants - 1088; Viruses - 235; Other Eukaryotes - 794 (source: NCBI BLink).;Actin-binding FH2 (formin homology 2) family protein transcript=eq;prot=eq; - 3 No
BD3G36510 bdi Rho GTPase binding (Blast2GO) pid=Bradi3g36510.1;tid=Bradi3g36510.1;GeneName=Bradi3g36510;transcript=eq;prot=eq + Bd3 No
BD5G12470 bdi Rho GTPase binding (Blast2GO) pid=Bradi5g12470.1;tid=Bradi5g12470.1;GeneName=Bradi5g12470;transcript=eq;prot=eq - Bd5 No
CP00048G00830 cpa name=evm.TU.supercontig_48.83;pid=evm.TU.supercontig_48.83;prot=eq;transcript=eq - supercontig_48 No
FV6G05070 fve Formin-like protein 11 (AtFH11), Precursor (similar to) transcript=eq;prot=eq;pid=gene22158 + LG6 No
GM10G29300 gma 10 pid=16280333;transcript=eq;prot=eq;name=Glyma10g29300.1 + Gm10 No
GM20G37980 gma 20 pid=16318234;transcript=eq;prot=eq;name=Glyma20g37980.1 - Gm20 No
MD04G016450 mdo transcript=eq;prot=eq;pid=MDP0000140633;tid=MDP0000140633;contig=MDC015949.215 + 4 No
MD12G021890 mdo transcript=eq;prot=eq;pid=MDP0000270134;tid=MDP0000270134;contig=MDC000224.417 + 12 No
ME03614G04960 mes PACid=17965820;RNAname=cassava4.1_000990m;GeneName=cassava4.1_000990m.g;transcript=eq;prot=eq - scaffold03614 No
ME11110G00160 mes PACid=17966620;RNAname=cassava4.1_000813m;GeneName=cassava4.1_000813m.g;transcript=eq;prot=eq - scaffold11110 No
MT1G083260 mtr Formin-like protein 11 (AHRD V1 *-*- Q9MA60); contains Interpro domain(s) IPR015425 Actin-binding FH2 transcript=eq;prot=eq;pid=Medtr1g083260.1; - 1 No
OS04G38810 osa formin, putative, expressed transcript=eq;prot=eq; - 4 No
OS08G33430 osa formin, putative, expressed transcript=eq;prot=eq; + 8 No
OSINDICA_04G30400 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC017783; - Chr04 No
OSINDICA_08G31480 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC026823; + Chr08 No
PT05G02450 ptr PACid=17315620;name=POPTR_0005s02640;alias=pt032186m; transcript=eq;prot=eq;protein_id=17315620; + scaffold_5 No
PT13G01670 ptr PACid=17343766;name=POPTR_0013s01860;alias=pt030329m,fgenesh4_pm.C_LG_XIII000076; transcript=eq;prot=eq;protein_id=17343766; + scaffold_13 No
RC30128G02090 rco name=30128.m008817;gene=30128.t000278;note=30128.t000278;transcript=eq;prot=eq - 30128 No
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