Sub-family  

Parent family
HOM002051
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO004954 has 26 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G00450 aly name=fgenesh1_pg.C_scaffold_3000042;pid=340279;prot=eq;tid=340279 - scaffold_3 No
AT3G01660 ath S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G29590.1); Has 1347 Blast hits to 1347 proteins in 403 species: Archae - 26; Bacteria - 759; Metazoa - 25; Fungi - 12; Plants - 94; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink).;S-adenosyl-L-methionine-dependent methyltransferases superfamily protein transcript=eq;prot=eq; + 3 No
BD5G13580 bdi pid=Bradi5g13580.1;tid=Bradi5g13580.1;GeneName=Bradi5g13580;transcript=eq;prot=eq + Bd5 No
CP00130G00630 cpa name=evm.TU.supercontig_130.63;pid=evm.TU.supercontig_130.63;prot=eq;transcript=eq - supercontig_130 No
CR12G13260 cre name=estExt_fgenesh2_pg.C_200137;pid=190827;prot=eq;tid=190827;transcript=eq + chromosome_12 No
FV0G40250 fve Methyltransferase-like protein 7B, Precursor (probable) transcript=eq;prot=eq;pid=gene27979 + scf0513124 No
GM19G22900 gma 19 pid=16312618;transcript=eq;prot=eq;name=Glyma19g22900.1 + Gm19 No
LJ1G039450 lja prot=eq;transcript=eq;scaffold=CM0001;name=chr1.CM0001.680.nc + chr1 No
MD00G270200 mdo transcript=eq;prot=eq;pid=MDP0000193012;tid=MDP0000193012;contig=MDC011581.354 - MDC011581.354 No
MD00G475240 mdo transcript=eq;prot=eq;pid=MDP0000501816;tid=MDP0000501816;contig=MDC022111.144 - MDC022111.144 No
ME11635G00070 mes PACid=17982528;RNAname=cassava4.1_013213m;GeneName=cassava4.1_013213m.g;transcript=eq;prot=eq + scaffold11635 No
MRCC299_13G03730 mrcc299 name=fgenesh2_pm.C_Chr_13000065;pid=98263;prot=eq;tid=98263;transcript=eq + Chr_13 No
MT7G032900 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR013216 Methyltransferase type 11 transcript=eq;prot=eq;pid=Medtr7g032900.1; - 7 No
OL04G04190 olu NULL name=e_gwEuk.4.454.1,pid=37443,prot=eq,tid=37443 + Chr_4 No
OS04G40530 osa methyltransferase domain containing protein, expressed transcript=eq;prot=eq; + 4 No
OSINDICA_04G32380 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC017939; + Chr04 No
OT04G04440 ota name=OT04G04440;protein_id=CAL51842.1;prot=eq + chrom04 No
PP00001G04500 ppa NULL name=e_gw1.1.620.1,pid=110754,prot=eq,tid=110754 - scaffold_1 No
PT01G35060 ptr PACid=17305140;name=POPTR_0001s35820;alias=pt039555m; transcript=eq;prot=eq;protein_id=17305140; + scaffold_1 No
RC29633G00480 rco name=29633.m000930;gene=29633.t000049;note=29633.t000049;transcript=eq;prot=eq - 29633 No
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