Sub-family  

Parent family
HOM000004
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO004919 has 26 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G12280 aly name=fgenesh2_kg.2__808__AT3G24550.1;pid=475678;prot=eq;tid=475678 - scaffold_2 No
AL3G27990 aly name=fgenesh2_kg.3__2668__AT3G24550.1;pid=479967;prot=eq;tid=479967 + scaffold_3 No
AT3G24550 ath encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection.;proline extensin-like receptor kinase 1 transcript=eq;prot=eq; + 3 No
BD2G07560 bdi protein kinase family protein, putative, expressed, subfamily PERK pid=Bradi2g07560.1;tid=Bradi2g07560.1;GeneName=Bradi2g07560;transcript=eq;prot=eq + Bd2 No
BD2G31990 bdi protein kinase family protein, putative, expressed, subfamily PERK pid=Bradi2g31990.1;tid=Bradi2g31990.1;GeneName=Bradi2g31990;transcript=eq;prot=eq + Bd2 No
CP00023G00830 cpa name=evm.TU.supercontig_23.83;pid=evm.TU.supercontig_23.83;prot=eq;transcript=eq - supercontig_23 No
FV1G07050 fve Somatic embryogenesis receptor kinase 1 (AtSERK1), Precursor (similar to) transcript=eq;prot=eq;pid=gene30893 - LG1 No
GM07G09420 gma 07 pid=16266749;transcript=eq;prot=eq;name=Glyma07g09420.1 - Gm07 No
GM09G32390 gma 09 pid=16276930;transcript=eq;prot=eq;name=Glyma09g32390.1 + Gm09 No
LJ0G016710 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_010413;name=LjSGA_010413.1 - LjSGA_010413 No
MD00G364610 mdo transcript=eq;prot=eq;pid=MDP0000140444;tid=MDP0000140444;contig=MDC016431.153 - MDC016431.153 No
MD15G012010 mdo transcript=eq;prot=eq;pid=MDP0000270414;tid=MDP0000270414;contig=MDC000552.145 - 15 No
ME00847G00990 mes PACid=17985918;RNAname=cassava4.1_003115m;GeneName=cassava4.1_003115m.g;transcript=ne;prot=eq - scaffold00847 No
MT6G088610 mtr Somatic embryogenesis receptor kinase 1 (AHRD V1 *-*- Q94AG2); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase transcript=eq;prot=eq;pid=Medtr6g088610.1; - 6 No
OS01G12720 osa protein kinase domain containing protein, expressed transcript=eq;prot=eq; + 1 No
OSINDICA_01G11740 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000825; + Chr01 No
OSINDICA_05G10940 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC020095; - Chr05 No
PT18G07850 ptr PACid=17336151;name=POPTR_0018s08800;alias=pt008309m; transcript=eq;prot=eq;protein_id=17336151; + scaffold_18 No
RC29912G02380 rco name=29912.m005515;gene=29912.t000241;note=29912.t000241;transcript=eq;prot=eq - 29912 No
SB09G007240 sbi 9 prot=eq;pid=5060271;tid=5060271 + chr_9 No
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