Sub-family  

Parent family
HOM000034
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO004835 has 26 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G19390 aly name=fgenesh2_kg.1__2021__AT1G18480.1;pid=472067;prot=eq;tid=472067 + scaffold_1 No
AT1G18480 ath Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G07010.1); Has 638 Blast hits to 634 proteins in 194 species: Archae - 15; Bacteria - 274; Metazoa - 0; Fungi - 21; Plants - 102; Viruses - 3; Other Eukaryotes - 223 (source: NCBI BLink).;Calcineurin-like metallo-phosphoesterase superfamily protein transcript=eq;prot=eq; + 1 No
BD4G20750 bdi pid=Bradi4g20750.1;tid=Bradi4g20750.1;GeneName=Bradi4g20750;transcript=eq;prot=eq - Bd4 No
CP00009G03640 cpa name=evm.TU.supercontig_9.364;pid=evm.TU.supercontig_9.364;prot=eq;transcript=eq - supercontig_9 No
CR17G04750 cre name=Chlre2_kg.scaffold_97000017;pid=154846;prot=eq;tid=154846;transcript=eq + chromosome_17 No
FV2G43290 fve conserved hypothetical protein transcript=eq;prot=eq;pid=gene21735 - LG2 No
GM19G13570 gma 19 pid=16312395;transcript=eq;prot=eq;name=Glyma19g13570.1 - Gm19 No
MD00G325760 mdo transcript=eq;prot=eq;pid=MDP0000769617;tid=MDP0000769617;contig=MDC013782.459 + MDC013782.459 No
MD00G439510 mdo transcript=eq;prot=eq;pid=MDP0000899519;tid=MDP0000899519;contig=MDC020110.318 - MDC020110.318 No
MD00G454520 mdo transcript=eq;prot=eq;pid=MDP0000465067;tid=MDP0000465067;contig=MDC020977.535 - MDC020977.535 No
ME07947G00030 mes PACid=17972799;RNAname=cassava4.1_008887m;GeneName=cassava4.1_008887m.g;transcript=eq;prot=eq + scaffold07947 No
MRCC299_05G02910 mrcc299 name=gw2.05.320.1;pid=69358;prot=eq;tid=69358;transcript=eq + Chr_05 No
MT7G006040 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004843 Metallophosphoesterase transcript=eq;prot=eq;pid=Medtr7g006040.1; + 7 No
OL05G02590 olu NULL name=e_gwEuk.5.237.1,pid=38815,prot=eq,tid=38815 + Chr_5 No
OS11G15570 osa Ser%2FThr protein phosphatase family protein, putative, expressed transcript=eq;prot=eq; + 11 No
OSINDICA_07G09520 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC022940; - Chr07 No
OT05G02700 ota vesicle tethering family protein (ISS); name=OT05G02700;protein_id=CAL54025.1;prot=eq + chrom05 No
PP00098G00410 ppa NULL name=estExt_Genewise1.C_980065,pid=214162,prot=eq,tid=214162 - scaffold_98 No
PT13G12550 ptr PACid=17332687;name=POPTR_0013s13120;alias=pt030747m,grail3.0142003901; transcript=eq;prot=eq;protein_id=17332687; + scaffold_13 No
RC29747G00230 rco name=29747.m001066;gene=29747.t000023;note=29747.t000023;transcript=eq;prot=eq + 29747 No
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