Sub-family  

Parent family
HOM000104
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO004721 has 27 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT2G19120 ath P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G30100.1); Has 5930 Blast hits to 5690 proteins in 1157 species: Archae - 188; Bacteria - 1788; Metazoa - 1227; Fungi - 954; Plants - 650; Viruses - 225; Other Eukaryotes - 898 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; - 2 No
AT4G30100 ath P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G19120.1); Has 5876 Blast hits to 5615 proteins in 1104 species: Archae - 176; Bacteria - 1754; Metazoa - 1255; Fungi - 973; Plants - 640; Viruses - 179; Other Eukaryotes - 899 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; + 4 No
BD3G21287 bdi pid=Bradi3g21287.2;tid=Bradi3g21287.2;GeneName=Bradi3g21287;transcript=eq;prot=eq + Bd3 No
BD4G14650 bdi ATP-dependent 5'-3' DNA helicase activity (Blast2GO) pid=Bradi4g14650.1;tid=Bradi4g14650.1;GeneName=Bradi4g14650;transcript=eq;prot=eq + Bd4 No
CP00066G00740 cpa name=evm.TU.supercontig_66.74;pid=evm.TU.supercontig_66.74;prot=eq;transcript=eq + supercontig_66 No
FV5G19010 fve hypothetical protein transcript=eq;prot=eq;pid=gene22105 - LG5 No
GM07G04190 gma 07 pid=16266135;transcript=eq;prot=eq;name=Glyma07g04190.1 - Gm07 No
GM16G00900 gma 16 pid=16301028;transcript=eq;prot=eq;name=Glyma16g00900.1 - Gm16 No
MD00G356420 mdo transcript=eq;prot=eq;pid=MDP0000715379;tid=MDP0000715379;contig=MDC015951.112 + MDC015951.112 No
MD01G002640 mdo transcript=eq;prot=eq;pid=MDP0000302730;tid=MDP0000302730;contig=MDC015951.118 + 1 No
MD08G018160 mdo transcript=eq;prot=eq;pid=MDP0000316445;tid=MDP0000316445;contig=MDC025512.25 - 8 No
ME01945G00150 mes PACid=17979719;RNAname=cassava4.1_000300m;GeneName=cassava4.1_000300m.g;transcript=eq;prot=eq + scaffold01945 No
ME06825G00390 mes PACid=17971697;RNAname=cassava4.1_000285m;GeneName=cassava4.1_000285m.g;transcript=eq;prot=eq - scaffold06825 No
MRCC299_09G02130 mrcc299 name=EuGene.0900010205;pid=61222;prot=eq;tid=61222;transcript=eq - Chr_09 No
MT8G020390 mtr Helicase sen1 (AHRD V1 *-*- Q92355) transcript=eq;prot=eq;pid=Medtr8g020390.1; - 8 No
OL02G04750 olu NULL name=eugene.0200010376,pid=30189,prot=eq,tid=30189 + Chr_2 No
OL02G04760 olu NULL name=eugene1.1.0200013760,prot=none + Chr_2 No
OS10G02930 osa helicase SEN1, putative, expressed transcript=eq;prot=eq; - 10 No
OSINDICA_10G01610 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC029772; - Chr10 No
OT02G04590 ota Sen1 Sen1-related helicase (IC); name=OT02G04590;protein_id=CAL52334.2;prot=eq + chrom02 No
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