Sub-family  

Parent family
HOM002038
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO004615 has 27 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G11710 aly name=scaffold_701235.1;pid=913493;prot=eq;tid=945006 + scaffold_7 No
AT4G29940 ath Homeodomain protein (PRHA). Expression of the gene differs in various vegetative and floral plant tissues and is positively influenced by the phytohormone auxin. It is often associated with regions of developing vascular tissue. The prha promoter is highly responsive to the synthetic auxin, naphthalene acetic acid, in transient assays using tobacco protoplasts. The PRHA protein has the capacity to bind to TAATTG core sequence elements but requires additional adjacent bases for high-affinity binding.;pathogenesis related homeodomain protein A transcript=eq;prot=eq; - 4 No
BD3G03747 bdi pid=Bradi3g03747.1;tid=Bradi3g03747.1;GeneName=Bradi3g03747;transcript=eq;prot=eq + Bd3 No
CP00095G00130 cpa name=evm.TU.supercontig_95.13;pid=evm.TU.supercontig_95.13;prot=eq;transcript=eq - supercontig_95 No
FV4G04600 fve Pathogenesis-related homeodomain protein (PRHA) (similar to) transcript=eq;prot=eq;pid=gene17249 + LG4 No
GM09G06730 gma 09 pid=16275011;transcript=eq;prot=eq;name=Glyma09g06730.1 + Gm09 No
GM13G00540 gma 13 pid=16289224;transcript=eq;prot=eq;name=Glyma13g00540.1 - Gm13 No
GM15G17970 gma 15 pid=16299159;transcript=eq;prot=eq;name=Glyma15g17970.1 + Gm15 No
GM17G06690 gma 17 pid=16304654;transcript=eq;prot=eq;name=Glyma17g06690.1 - Gm17 No
LJ4G023470 lja partial;prot=eq;transcript=eq;scaffold=CM0244;name=chr4.CM0244.10.nd + chr4 No
LJ6G011490 lja prot=eq;transcript=eq;scaffold=CM0045;name=chr6.CM0045.30.nc - chr6 No
MD02G007320 mdo transcript=eq;prot=eq;pid=MDP0000135135;tid=MDP0000135135;contig=MDC003413.764 + 2 No
MD13G028190 mdo transcript=eq;prot=eq;pid=MDP0000311077;tid=MDP0000311077;contig=MDC019719.232 - 13 No
ME08370G00010 mes PACid=17964759;RNAname=cassava4.1_031748m;GeneName=cassava4.1_031748m.g;transcript=eq;prot=eq - scaffold08370 No
MT2G038000 mtr Pathogenesis-related homeodomain protein (AHRD V1 *-*- P48785); contains Interpro domain(s) IPR001356 Homeobox transcript=eq;prot=eq;pid=Medtr2g038000.1; + 2 No
OS02G05450 osa Homeobox domain containing protein, expressed transcript=eq;prot=eq; + 2 No
OSINDICA_02G04990 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC012521; + Chr02 No
PP00055G00200 ppa NULL name=fgenesh1_pg.scaffold_55000024,pid=75761,prot=eq,tid=75761 - scaffold_55 No
PP00267G00330 ppa NULL name=estExt_fgenesh1_pg.C_2670037,pid=170895,prot=eq,tid=170895 + scaffold_267 No
PT06G07330 ptr PACid=17321650;name=POPTR_0006s07520;alias=pt017176m,eugene3.00060625; transcript=eq;prot=eq;protein_id=17321650; - scaffold_6 No
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