Sub-family 
- Id
- ORTHO004604
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (1 gene)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (3 genes)
- gma
- Glycine max (2 genes)
- mdo
- Malus domestica (2 genes)
- mtr
- Medicago truncatula (1 gene)
- osa
- Oryza sativa ssp. japonica (3 genes)
- osaindica
- Oryza sativa ssp. indica (3 genes)
- ppa
- Physcomitrella patens (1 gene)
- ptr
- Populus trichocarpa (1 gene)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- smo
- Selaginella moellendorffii (2 genes)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (1 gene)
The gene family ORTHO004604 has 27 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of this gene family.
- ...the expansion/depletion of species in this gene family.
View
- ...the multiple sequence alignment of the homologous gene family.
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
- ...the functional annotation associated with this gene family.
Index of genes with 1 constraints:
- gene family : ORTHO004604
Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20
gene_id | species | description | comment | strand | chr | outlier |
---|---|---|---|---|---|---|
AL7G04040 | aly | name=scaffold_700430.1;pid=912688;prot=eq;tid=944201 | - | scaffold_7 | No | |
AT4G36760 | ath | Arabidopsis aminopeptidase P1;aminopeptidase P1 | transcript=eq;prot=eq; | + | 4 | No |
BD4G16980 | bdi | aminopeptidase activity (Blast2GO) | pid=Bradi4g16980.1;tid=Bradi4g16980.1;GeneName=Bradi4g16980;transcript=eq;prot=eq | + | Bd4 | No |
CP00158G00130 | cpa | name=evm.TU.supercontig_158.13;pid=evm.TU.supercontig_158.13;prot=eq;transcript=eq | - | supercontig_158 | No | |
FV5G37980 | fve | Anthocyanidin 3-O-glucosyltransferase 5 (probable) | transcript=eq;prot=eq;pid=gene29531 | + | LG5 | No |
FV5G38000 | fve | Anthocyanidin 3-O-glucosyltransferase 5 (putative) | transcript=eq;prot=eq;pid=gene29533 | + | LG5 | No |
FV5G38010 | fve | Xaa-Pro aminopeptidase 1 (sAmp) (probable) | transcript=eq;prot=eq;pid=gene29534 | - | LG5 | No |
GM01G38410 | gma | 01 | pid=16245598;transcript=eq;prot=eq;name=Glyma01g38410.1 | + | Gm01 | No |
GM11G06900 | gma | 11 | pid=16282944;transcript=eq;prot=eq;name=Glyma11g06900.1 | - | Gm11 | No |
MD00G138890 | mdo | transcript=eq;prot=eq;pid=MDP0000181420;tid=MDP0000181420;contig=MDC005910.303 | - | MDC005910.303 | No | |
MD15G019720 | mdo | transcript=eq;prot=eq;pid=MDP0000301453;tid=MDP0000301453;contig=MDC015614.99 | + | 15 | No | |
MT5G019600 | mtr | Xaa-Pro aminopeptidase 2 (AHRD V1 **** Q93X45_SOLLC); contains Interpro domain(s) IPR000994 Peptidase M24, structural domain | transcript=eq;prot=eq;pid=Medtr5g019600.1; | - | 5 | No |
OS06G45360 | osa | peptidase, M24 family protein, putative, expressed | transcript=eq;prot=eq; | - | 6 | No |
OS11G33330 | osa | peptidase, M24 family protein, putative, expressed | transcript=eq;prot=eq; | - | 11 | No |
OS11G33340 | osa | peptidase, M24 family protein, putative, expressed | transcript=eq;prot=eq; | - | 11 | No |
OSINDICA_06G41310 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC011759; | - | Chr06 | No |
OSINDICA_11G24680 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC035442; | - | Chr11 | No |
OSINDICA_11G24690 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC035443; | - | Chr11 | No |
PP00096G00360 | ppa | NULL | name=e_gw1.96.22.1,pid=132399,prot=eq,tid=132399 | - | scaffold_96 | No |
PT07G11860 | ptr | PACid=17309827;name=POPTR_0007s12430;alias=pt026180m,Pt-APP1.2,estExt_fgenesh4_pg.C_LG_VII1026; | transcript=eq;prot=eq;protein_id=17309827; | - | scaffold_7 | No |