Sub-family  

Parent family
HOM000010
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO004568 has 27 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G25260 aly name=fgenesh2_kg.6__2505__AT5G25190.1;pid=489371;prot=eq;tid=489371 - scaffold_6 No
AT5G25190 ath encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.;Integrase-type DNA-binding superfamily protein transcript=eq;prot=eq; - 5 No
BD1G47480 bdi pid=Bradi1g47480.1;tid=Bradi1g47480.1;GeneName=Bradi1g47480;transcript=eq;prot=eq + Bd1 No
BD3G54160 bdi pid=Bradi3g54160.1;tid=Bradi3g54160.1;GeneName=Bradi3g54160;transcript=eq;prot=eq - Bd3 No
CP00127G00040 cpa name=evm.TU.supercontig_127.4;pid=evm.TU.supercontig_127.4;prot=eq;transcript=eq + supercontig_127 No
FV2G52060 fve Ethylene-responsive transcription factor ERF003 (probable) transcript=eq;prot=eq;pid=gene15036 + LG2 No
GM04G06690 gma 04 pid=16255097;transcript=eq;prot=eq;name=Glyma04g06690.1 - Gm04 No
GM06G06780 gma 06 pid=16261973;transcript=eq;prot=eq;name=Glyma06g06780.1 - Gm06 No
GM14G13470 gma 14 pid=16295377;transcript=eq;prot=eq;name=Glyma14g13470.1 - Gm14 No
GM17G33060 gma 17 pid=16306878;transcript=eq;prot=eq;name=Glyma17g33060.1 + Gm17 No
LJ1G021260 lja prot=eq;transcript=eq;scaffold=LjT03I11;name=chr1.LjT03I11.120.nd + chr1 No
MD00G292360 mdo transcript=eq;prot=eq;pid=MDP0000127054;tid=MDP0000127054;contig=MDC012482.157 - MDC012482.157 No
MD01G019750 mdo transcript=eq;prot=eq;pid=MDP0000297646;tid=MDP0000297646;contig=MDC011950.260 + 1 No
MD08G006640 mdo transcript=eq;prot=eq;pid=MDP0000243375;tid=MDP0000243375;contig=MDC016851.61 - 8 No
ME03049G00270 mes PACid=17959835;RNAname=cassava4.1_020911m;GeneName=cassava4.1_020911m.g;transcript=ne;prot=eq + scaffold03049 No
MT3G106290 mtr Ethylene-responsive transcription factor SHINE 3 (AHRD V1 *-** Q3E958); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding transcript=eq;prot=eq;pid=Medtr3g106290.1; - 3 No
OS06G08340 osa AP2 domain containing protein transcript=eq;prot=eq; + 6 No
OSINDICA_06G07720 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC009684; + Chr06 No
PP00058G00040 ppa NULL name=estExt_gwp_gw1.C_580005,pid=182480,prot=eq,tid=182480 - scaffold_58 No
PP00079G00170 ppa NULL name=fgenesh1_pg.scaffold_79000014,pid=79416,prot=eq,tid=79416 - scaffold_79 No
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