Sub-family  

Parent family
HOM000249
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO004344 has 27 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G01500 aly name=fgenesh2_kg.3__173__AT3G02380.1;pid=477472;prot=eq;tid=477472 - scaffold_3 No
AL6G15680 aly name=fgenesh2_kg.6__1563__AT5G15840.1;pid=488429;prot=eq;tid=488429 - scaffold_6 No
AT3G02380 ath homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins;CONSTANS-like 2 transcript=eq;prot=eq; - 3 No
AT5G15840 ath Encodes a protein showing similarities to zinc finger transcription factors, involved in regulation of flowering under long days. Acts upstream of FT and SOC1.;B-box type zinc finger protein with CCT domain transcript=eq;prot=eq; - 5 No
BD1G43670 bdi Homologous to barley CONSTANS-Like protein CO1 pid=Bradi1g43670.1;tid=Bradi1g43670.1;GeneName=Bradi1g43670;Name=BdCO1;transcript=eq;prot=eq - Bd1 No
BD3G56260 bdi Homologous to barley CONSTANS-Like protein CO2 pid=Bradi3g56260.1;tid=Bradi3g56260.1;GeneName=Bradi3g56260;Name=BdCO2;transcript=eq;prot=eq + Bd3 No
CP00070G00060 cpa name=evm.TU.supercontig_70.6;pid=evm.TU.supercontig_70.6;prot=eq;transcript=eq + supercontig_70 No
CR13G07070 cre name=acegs_kg.scaffold_38000029;pid=159133;prot=eq;tid=159133;transcript=eq + chromosome_13 No
FV6G41490 fve Zinc finger protein CONSTANS-LIKE 2 (similar to) transcript=eq;prot=eq;pid=gene04172 + LG6 No
GM08G28370 gma 08 pid=16272732;transcript=eq;prot=eq;name=Glyma08g28370.1 - Gm08 No
GM18G51320 gma 18 pid=16311125;transcript=eq;prot=eq;name=Glyma18g51320.1 - Gm18 No
LJ1G031410 lja partial;prot=eq;transcript=eq;scaffold=CM0215;name=chr1.CM0215.30.nd + chr1 No
MD00G094410 mdo transcript=eq;prot=eq;pid=MDP0000609638;tid=MDP0000609638;contig=MDC004027.211 - MDC004027.211 No
MD00G361300 mdo transcript=eq;prot=eq;pid=MDP0000140484;tid=MDP0000140484;contig=MDC016209.57 - MDC016209.57 No
MD09G005600 mdo transcript=eq;prot=eq;pid=MDP0000297093;tid=MDP0000297093;contig=MDC013124.81 - 9 No
MD17G005920 mdo transcript=eq;prot=eq;pid=MDP0000298635;tid=MDP0000298635;contig=MDC013124.82 - 17 No
ME04043G01430 mes PACid=17987426;RNAname=cassava4.1_009662m;GeneName=cassava4.1_009662m.g;transcript=eq;prot=eq + scaffold04043 No
ME06871G01030 mes PACid=17989598;RNAname=cassava4.1_009557m;GeneName=cassava4.1_009557m.g;transcript=eq;prot=eq + scaffold06871 No
OS06G16370 osa CCT%2FB%2Dbox zinc finger protein, putative, expressed transcript=eq;prot=eq; + 6 No
OSINDICA_06G15400 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC010188; + Chr06 No
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