Sub-family  

Parent family
HOM000739
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (4 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO004308 has 27 genes in 22 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G09890 aly name=fgenesh1_pm.C_scaffold_2000530;pid=315497;prot=eq;tid=315497 + scaffold_2 No
AL2G10990 aly name=fgenesh1_pm.C_scaffold_2000596;pid=315563;prot=eq;tid=315563 - scaffold_2 No
ATCG00810 ath encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex;ribosomal protein L22 transcript=eq;prot=eq; - chloroplast No
BDCG00790 bdi rpl22;ribosomal protein L22;protein_id=ACF08677.1; transl_table=11; - chloroplast No
CPCG00820 cpa rpl22;ribosomal protein L22;protein_id=ABY86822.1; transl_table=11; - chloroplast No
CR13G03960 cre name=pasa_Sanger_mRNA11339;pid=413651;prot=eq;tid=401635;transcript=eq - chromosome_13 No
GM05G09270 gma 05 pid=16258775;transcript=eq;prot=eq;name=Glyma05g09270.1 - Gm05 No
GM19G00820 gma 19 pid=16311466;transcript=eq;prot=eq;name=Glyma19g00820.1 - Gm19 No
LJ2G009760 lja partial;prot=eq;transcript=eq;scaffold=CM0373;name=chr2.CM0373.1070.nd + chr2 No
MECG00860 mes rpl22;ribosomal protein L22;protein_id=ABV66193.1; transl_table=11; - chloroplast No
MRCC299_03G07400 mrcc299 name=estExt_fgenesh2_pg.C_Chr_030492;pid=105354;prot=eq;tid=105354;transcript=eq - Chr_03 No
MT7G100410 mtr 50S ribosomal protein L22, chloroplastic (AHRD V1 *-*- P49163); contains Interpro domain(s) IPR005727 Ribosomal protein L22, bacterial-type transcript=eq;prot=eq;pid=Medtr7g100410.1; - 7 No
OL17G00690 olu NULL name=fgenesh1_pg.C_Chr_17000050,pid=18674,prot=eq,tid=18674 + Chr_17 No
OS04G16822 osa chloroplast 50S ribosomal protein L22, putative transcript=eq;prot=eq; + 4 No
OS08G15268 osa chloroplast 50S ribosomal protein L22, putative transcript=eq;prot=eq; + 8 No
OS09G24414 osa chloroplast 50S ribosomal protein L22, putative transcript=eq;prot=eq; + 9 No
OSCG00910 osa rpl22;ribosomal protein L22;protein_id=CAA33935.1; transl_table=11; - chloroplast No
OSINDICA_CG00450 osaindica rpl22;ribosomal protein L22;protein_id=AAS46083.1; - chloroplast No
OT18G00740 ota 50S ribosomal protein L22 (ISS); name=OT18G00740;protein_id=CAL58521.1;prot=eq + chrom18 No
PPCG00920 ppa rpl22;ribosomal protein L22;protein_id=BAC85081.1; transl_table=11; - chloroplast No
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