Sub-family 
- Id
- ORTHO004233
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000789
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (2 genes)
- ath
- Arabidopsis thaliana (2 genes)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- cre
- Chlamydomonas reinhardtii (2 genes)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (4 genes)
- mdo
- Malus domestica (1 gene)
- mes
- Manihot esculenta (1 gene)
- mrcc299
- Micromonas sp. RCC299 (1 gene)
- olu
- Ostreococcus lucimarinus (1 gene)
- ota
- Ostreococcus tauri (1 gene)
- ptr
- Populus trichocarpa (3 genes)
- rco
- Ricinus communis (2 genes)
- tca
- Theobroma cacao (1 gene)
- vca
- Volvox carteri (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (1 gene)
The gene family ORTHO004233 has 27 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO004233
Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL1G17170 | aly | name=fgenesh2_kg.1__1782__AT1G16310.1;pid=471828;prot=eq;tid=471828 | + | scaffold_1 | No | |
| AL2G28530 | aly | name=fgenesh2_kg.2__2250__AT1G79520.1;pid=477120;prot=eq;tid=477120 | - | scaffold_2 | No | |
| AT1G16310 | ath | Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5067 Blast hits to 5063 proteins in 1838 species: Archae - 163; Bacteria - 4116; Metazoa - 44; Fungi - 281; Plants - 207; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink).;Cation efflux family protein | transcript=eq;prot=eq; | + | 1 | No |
| AT1G79520 | ath | Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G16310.1).;Cation efflux family protein | transcript=eq;prot=eq; | - | 1 | No |
| BD2G02050 | bdi | zinc ion transmembrane transporter activity (Blast2GO) | pid=Bradi2g02050.1;tid=Bradi2g02050.1;GeneName=Bradi2g02050;transcript=eq;prot=eq | - | Bd2 | No |
| CP00032G00640 | cpa | name=evm.TU.supercontig_32.64;pid=evm.TU.supercontig_32.64;prot=eq;transcript=eq | + | supercontig_32 | No | |
| CR03G02780 | cre | name=HAN_fgenesh2_pg.C_scaffold_34000009;pid=195957;prot=eq;tid=195957;transcript=eq | - | chromosome_3 | No | |
| CR03G02790 | cre | name=Chlre2_kg.scaffold_34000008;pid=150292;prot=eq;tid=150292;transcript=eq | - | chromosome_3 | No | |
| FV7G02910 | fve | Putative metal tolerance protein C3 (AtMTPc3) (similar to) | transcript=eq;prot=eq;pid=gene18485 | - | LG7 | No |
| GM08G17570 | gma | 08 | pid=16271494;transcript=eq;prot=eq;name=Glyma08g17570.1 | - | Gm08 | No |
| GM09G15150 | gma | 09 | pid=16275645;transcript=eq;prot=eq;name=Glyma09g15150.1 | + | Gm09 | No |
| GM15G41580 | gma | 15 | pid=16300742;transcript=eq;prot=eq;name=Glyma15g41580.1 | + | Gm15 | No |
| GM15G41590 | gma | 15 | pid=16300743;transcript=eq;prot=eq;name=Glyma15g41590.1 | + | Gm15 | No |
| MD05G010290 | mdo | transcript=eq;prot=eq;pid=MDP0000188137;tid=MDP0000188137;contig=MDC008618.312 | - | 5 | No | |
| ME10735G00010 | mes | PACid=17961375;RNAname=cassava4.1_025224m;GeneName=cassava4.1_025224m.g;transcript=eq;prot=eq | - | scaffold10735 | No | |
| MRCC299_01G06640 | mrcc299 | name=EuGene.0100010706;pid=55479;prot=eq;tid=55479;transcript=eq | - | Chr_01 | No | |
| OL03G02760 | olu | NULL | name=e_gwEuk.3.280.1,pid=33926,prot=eq,tid=33926 | + | Chr_3 | No |
| OT03G02710 | ota | cation diffusion facilitator 10 (ISS); | name=OT03G02710;protein_id=CAL52922.1;prot=eq | + | chrom03 | No |
| PT10G16820 | ptr | PACid=17323990;name=POPTR_0010s17960;alias=pt011997m; | transcript=eq;prot=eq;protein_id=17323990; | + | scaffold_10 | No |
| PT10G16840 | ptr | PACid=17338353;name=POPTR_0010s17980;alias=pt013455m; | transcript=eq;prot=eq;protein_id=17338353; | + | scaffold_10 | No |