Sub-family  

Parent family
HOM000789
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
ota
Ostreococcus tauri (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO004233 has 27 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G17170 aly name=fgenesh2_kg.1__1782__AT1G16310.1;pid=471828;prot=eq;tid=471828 + scaffold_1 No
AL2G28530 aly name=fgenesh2_kg.2__2250__AT1G79520.1;pid=477120;prot=eq;tid=477120 - scaffold_2 No
AT1G16310 ath Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5067 Blast hits to 5063 proteins in 1838 species: Archae - 163; Bacteria - 4116; Metazoa - 44; Fungi - 281; Plants - 207; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink).;Cation efflux family protein transcript=eq;prot=eq; + 1 No
AT1G79520 ath Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G16310.1).;Cation efflux family protein transcript=eq;prot=eq; - 1 No
BD2G02050 bdi zinc ion transmembrane transporter activity (Blast2GO) pid=Bradi2g02050.1;tid=Bradi2g02050.1;GeneName=Bradi2g02050;transcript=eq;prot=eq - Bd2 No
CP00032G00640 cpa name=evm.TU.supercontig_32.64;pid=evm.TU.supercontig_32.64;prot=eq;transcript=eq + supercontig_32 No
CR03G02780 cre name=HAN_fgenesh2_pg.C_scaffold_34000009;pid=195957;prot=eq;tid=195957;transcript=eq - chromosome_3 No
CR03G02790 cre name=Chlre2_kg.scaffold_34000008;pid=150292;prot=eq;tid=150292;transcript=eq - chromosome_3 No
FV7G02910 fve Putative metal tolerance protein C3 (AtMTPc3) (similar to) transcript=eq;prot=eq;pid=gene18485 - LG7 No
GM08G17570 gma 08 pid=16271494;transcript=eq;prot=eq;name=Glyma08g17570.1 - Gm08 No
GM09G15150 gma 09 pid=16275645;transcript=eq;prot=eq;name=Glyma09g15150.1 + Gm09 No
GM15G41580 gma 15 pid=16300742;transcript=eq;prot=eq;name=Glyma15g41580.1 + Gm15 No
GM15G41590 gma 15 pid=16300743;transcript=eq;prot=eq;name=Glyma15g41590.1 + Gm15 No
MD05G010290 mdo transcript=eq;prot=eq;pid=MDP0000188137;tid=MDP0000188137;contig=MDC008618.312 - 5 No
ME10735G00010 mes PACid=17961375;RNAname=cassava4.1_025224m;GeneName=cassava4.1_025224m.g;transcript=eq;prot=eq - scaffold10735 No
MRCC299_01G06640 mrcc299 name=EuGene.0100010706;pid=55479;prot=eq;tid=55479;transcript=eq - Chr_01 No
OL03G02760 olu NULL name=e_gwEuk.3.280.1,pid=33926,prot=eq,tid=33926 + Chr_3 No
OT03G02710 ota cation diffusion facilitator 10 (ISS); name=OT03G02710;protein_id=CAL52922.1;prot=eq + chrom03 No
PT10G16820 ptr PACid=17323990;name=POPTR_0010s17960;alias=pt011997m; transcript=eq;prot=eq;protein_id=17323990; + scaffold_10 No
PT10G16840 ptr PACid=17338353;name=POPTR_0010s17980;alias=pt013455m; transcript=eq;prot=eq;protein_id=17338353; + scaffold_10 No
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