Sub-family  

Parent family
HOM000453
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (3 genes)



The gene family ORTHO004217 has 27 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G07500 aly name=fgenesh2_kg.1__778__AT1G07890.1;pid=470824;prot=eq;tid=470824 + scaffold_1 No
AT1G07890 ath Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.;ascorbate peroxidase 1 transcript=eq;prot=eq; + 1 No
BD1G16510 bdi cytochrome-c peroxidase activity (Blast2GO) pid=Bradi1g16510.1;tid=Bradi1g16510.1;GeneName=Bradi1g16510;transcript=eq;prot=eq + Bd1 No
BD1G65820 bdi cytochrome-c peroxidase activity (Blast2GO) pid=Bradi1g65820.2;tid=Bradi1g65820.2;GeneName=Bradi1g65820;transcript=eq;prot=eq - Bd1 No
FV3G30160 fve L-ascorbate peroxidase, cytosolic (AP) (similar to) transcript=eq;prot=eq;pid=gene25391 - LG3 No
GM11G15680 gma 11 pid=16284028;transcript=eq;prot=eq;name=Glyma11g15680.1 + Gm11 No
GM12G07780 gma 12 pid=16286786;transcript=eq;prot=eq;name=Glyma12g07780.1 - Gm12 No
LJ3G030690 lja partial;prot=eq;transcript=eq;scaffold=LjT05P05;name=chr3.LjT05P05.90.nd + chr3 No
MD11G009470 mdo transcript=eq;prot=eq;pid=MDP0000199034;tid=MDP0000199034;contig=MDC011946.321 + 11 No
ME00506G00130 mes PACid=17991661;RNAname=cassava4.1_013461m;GeneName=cassava4.1_013461m.g;transcript=eq;prot=eq - scaffold00506 No
ME03750G00520 mes PACid=17980868;RNAname=cassava4.1_014423m;GeneName=cassava4.1_014423m.g;transcript=eq;prot=eq + scaffold03750 No
MRCC299_11G00980 mrcc299 name=est_cluster_kg.Chr_11__20__3200709:1;pid=109115;prot=eq;tid=109115;transcript=eq - Chr_11 No
MT4G061140 mtr Cytosolic ascorbate peroxidase (AHRD V1 **** Q41712_VIGUN); contains Interpro domain(s) IPR002207 Plant ascorbate peroxidase transcript=eq;prot=eq;pid=Medtr4g061140.1; - 4 No
OS03G17690 osa OsAPx1 %2D Cytosolic Ascorbate Peroxidase encoding gene 1%2D8, expressed transcript=eq;prot=eq; + 3 No
OSINDICA_03G16300 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC006067; + Chr03 No
OT09G01570 ota name=OT09G01570;protein_id=CAL55316.1;prot=eq - chrom09 No
PP00152G00440 ppa NULL name=fgenesh1_kg.scaffold_152000004,pid=63071,prot=eq,tid=63071 + scaffold_152 No
PP00152G00470 ppa NULL name=e_gw1.152.110.1,pid=138949,prot=eq,tid=138949 + scaffold_152 No
PT09G01880 ptr PACid=17315563;name=POPTR_0009s02070;alias=pt005038m,Pt-APX.3,estExt_fgenesh4_pg.C_LG_IX1399; transcript=eq;prot=eq;protein_id=17315563; - scaffold_9 No
RC29781G00010 rco name=29781.m000013;gene=29781.t000001;note=29781.t000001;transcript=eq;prot=eq + 29781 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier