Sub-family  

Parent family
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO003990 has 28 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G13500 aly name=fgenesh2_kg.6__1338__AT5G13800.2;pid=488204;prot=eq;tid=488204 - scaffold_6 No
AT5G13800 ath Encodes a pheophytinase that is involved in chlorophyll breakdown.;pheophytinase transcript=eq;prot=eq; - 5 No
BD1G35780 bdi pid=Bradi1g35780.1;tid=Bradi1g35780.1;GeneName=Bradi1g35780;transcript=eq;prot=eq - Bd1 No
CP00197G00220 cpa name=evm.TU.supercontig_197.22;pid=evm.TU.supercontig_197.22;prot=eq;transcript=eq - supercontig_197 No
CR12G06480 cre name=pasa_Sanger_mRNA7106;pid=425388;prot=eq;tid=397364;transcript=eq + chromosome_12 No
FV6G20710 fve Lipase 1, Precursor (probable) transcript=eq;prot=eq;pid=gene11981 + LG6 No
GM09G36010 gma 09 pid=16277347;transcript=eq;prot=eq;name=Glyma09g36010.1 + Gm09 No
GM11G16070 gma 11 pid=16284081;transcript=eq;prot=eq;name=Glyma11g16070.1 + Gm11 No
GM12G01320 gma 12 pid=16285956;transcript=eq;prot=eq;name=Glyma12g01320.1 - Gm12 No
LJ0G444190 lja partial;prot=eq;transcript=eq;scaffold=LjT28K11;name=LjT28K11.70.nd - chr0 No
MD00G411130 mdo transcript=eq;prot=eq;pid=MDP0000305112;tid=MDP0000305112;contig=MDC018703.50 - MDC018703.50 No
MD00G437700 mdo transcript=eq;prot=eq;pid=MDP0000312878;tid=MDP0000312878;contig=MDC020043.181 - MDC020043.181 No
MD07G001910 mdo transcript=eq;prot=eq;pid=MDP0000288597;tid=MDP0000288597;contig=MDC008676.378 - 7 No
ME02354G00040 mes PACid=17992023;RNAname=cassava4.1_005551m;GeneName=cassava4.1_005551m.g;transcript=eq;prot=eq - scaffold02354 No
MRCC299_03G07680 mrcc299 name=EuGene.0300010798;pid=57370;prot=eq;tid=57370;transcript=eq - Chr_03 No
MT3G034670 mtr Alpha/beta hydrolase-fold family protein (AHRD V1 ***- Q69XR3_ORYSJ); contains Interpro domain(s) IPR000073 Alpha/beta hydrolase fold-1 transcript=eq;prot=eq;pid=Medtr3g034670.1; - 3 No
OL01G04490 olu NULL name=gwEuk.1.343.1,pid=3905,prot=eq,tid=3905 + Chr_1 No
OS06G24730 osa hydrolase, alpha%2Fbeta fold family domain containing protein, expressed transcript=eq;prot=eq; + 6 No
OSINDICA_06G22590 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC010609; + Chr06 No
OT01G04270 ota hydrolase-like (ISS); name=OT01G04270;protein_id=CAL50341.1;prot=eq + chrom01 No
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