Sub-family  

Parent family
HOM000982
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO003963 has 28 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G01920 aly name=fgenesh2_kg.6__192__AT5G02820.1;pid=487058;prot=eq;tid=487058 + scaffold_6 No
AT5G02820 ath Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication;Spo11/DNA topoisomerase VI, subunit A protein transcript=eq;prot=eq; + 5 No
BD1G65870 bdi ATP binding (Blast2GO) pid=Bradi1g65870.1;tid=Bradi1g65870.1;GeneName=Bradi1g65870;transcript=eq;prot=eq - Bd1 No
CP00045G00320 cpa name=evm.TU.supercontig_45.32;pid=evm.TU.supercontig_45.32;prot=eq;transcript=eq + supercontig_45 No
CR02G02490 cre name=estExt_GenewiseW_1.C_70074;pid=76283;prot=eq;tid=76283;transcript=eq + chromosome_2 No
FV1G27680 fve DNA topoisomerase 6 subunit A (AtTOP6A) (putative) transcript=eq;prot=eq;pid=gene22036 + LG1 No
GM10G05540 gma 10 pid=16278673;transcript=eq;prot=eq;name=Glyma10g05540.1 + Gm10 No
GM13G19890 gma 13 pid=16290897;transcript=eq;prot=eq;name=Glyma13g19890.1 + Gm13 No
LJ5G008830 lja prot=eq;transcript=eq;scaffold=LjT08O17;name=chr5.LjT08O17.50.nd - chr5 No
MD00G023450 mdo transcript=eq;prot=eq;pid=MDP0000725634;tid=MDP0000725634;contig=MDC000980.356 + MDC000980.356 No
MD00G070510 mdo transcript=eq;prot=eq;pid=MDP0000937252;tid=MDP0000937252;contig=MDC002936.313 - MDC002936.313 No
MD00G430920 mdo transcript=eq;prot=eq;pid=MDP0000948733;tid=MDP0000948733;contig=MDC019675.59 + MDC019675.59 No
ME11915G00080 mes PACid=17961367;RNAname=cassava4.1_008203m;GeneName=cassava4.1_008203m.g;transcript=eq;prot=eq + scaffold11915 No
MRCC299_01G02650 mrcc299 name=e_gw2.01.477.1;pid=77331;prot=eq;tid=77331;transcript=eq + Chr_01 No
MT5G084590 mtr DNA topoisomerase 6 subunit A (AHRD V1 **** Q9LZ03); contains Interpro domain(s) IPR002815 Spo11/DNA topoisomerase VI, subunit A transcript=eq;prot=eq;pid=Medtr5g084590.1; - 5 No
OL05G00550 olu NULL name=fgenesh1_pm.C_Chr_5000013,pid=12516,prot=eq,tid=12516 + Chr_5 No
OS03G17610 osa OsTOP6A3 %2D Topoisomerase 6 subunit A homolog 3, expressed transcript=eq;prot=eq; + 3 No
OSINDICA_03G16200 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC006061; + Chr03 No
OT05G00510 ota topoisomerase 6 subunit A (ISS); name=OT05G00510;protein_id=CAL53806.1;prot=eq + chrom05 No
PP00062G00640 ppa NULL name=e_gw1.62.39.1,pid=126981,prot=eq,tid=126981 - scaffold_62 No
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