Sub-family  

Parent family
HOM000125
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO003929 has 28 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G16200 aly name=fgenesh2_kg.5__1104__AT3G47470.1;pid=485112;prot=eq;tid=485112 - scaffold_5 No
AT3G47470 ath Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.;light-harvesting chlorophyll-protein complex I subunit A4 transcript=eq;prot=eq; - 3 No
BD3G36760 bdi pid=Bradi3g36760.1;tid=Bradi3g36760.1;GeneName=Bradi3g36760;transcript=eq;prot=eq - Bd3 No
BD4G30060 bdi pid=Bradi4g30060.2;tid=Bradi4g30060.2;GeneName=Bradi4g30060;transcript=eq;prot=eq + Bd4 No
CP00111G00180 cpa name=evm.TU.supercontig_111.18;pid=evm.TU.supercontig_111.18;prot=eq;transcript=eq + supercontig_111 No
CR10G07510 cre name=fgenesh2_pg.C_scaffold_4000124;pid=168073;prot=eq;tid=168073;transcript=eq - chromosome_10 No
CR13G07600 cre name=estExt_fgenesh2_pg.C_380059;pid=192961;prot=eq;tid=192961;transcript=eq + chromosome_13 No
FV5G13100 fve Chlorophyll a-b binding protein P4, chloroplastic, Precursor (putative) transcript=eq;prot=eq;pid=gene26029 + LG5 No
GM04G33360 gma 04 pid=16256621;transcript=eq;prot=eq;name=Glyma04g33360.1 + Gm04 No
GM06G20960 gma 06 pid=16263671;transcript=eq;prot=eq;name=Glyma06g20960.1 - Gm06 No
MD00G470770 mdo transcript=eq;prot=eq;pid=MDP0000153663;tid=MDP0000153663;contig=MDC021871.75 - MDC021871.75 No
MD06G015800 mdo transcript=eq;prot=eq;pid=MDP0000193128;tid=MDP0000193128;contig=MDC009270.346 - 6 No
MD14G019280 mdo transcript=eq;prot=eq;pid=MDP0000291218;tid=MDP0000291218;contig=MDC009270.341 - 14 No
ME08359G02220 mes PACid=17968993;RNAname=cassava4.1_012195m;GeneName=cassava4.1_012195m.g;transcript=eq;prot=eq + scaffold08359 No
ME12794G02250 mes PACid=17974105;RNAname=cassava4.1_014559m;GeneName=cassava4.1_014559m.g;transcript=eq;prot=eq - scaffold12794 No
OL02G01560 olu NULL name=estExt_fgenesh1_pg.C_Chr_20122,pid=24045,prot=eq,tid=24045 - Chr_2 No
OS08G33820 osa chlorophyll A%2DB binding protein, putative, expressed transcript=eq;prot=eq; - 8 No
OSINDICA_08G31860 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC026849; - Chr08 No
OT02G05720 ota PSI-associated light-harvesting chlorophyll a/b binding protein (IC); name=OT02G05720;protein_id=CAL52447.1;prot=eq + chrom02 No
PP00032G00010 ppa NULL name=estExt_gwp_gw1.C_320002,pid=178694,prot=eq,tid=178694 + scaffold_32 No
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