Sub-family  

Parent family
HOM001055
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO003854 has 28 genes in 22 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G28080 aly name=fgenesh2_kg.3__2673__AT3G24590.1;pid=479972;prot=eq;tid=479972 + scaffold_3 No
AT3G24590 ath Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).;plastidic type i signal peptidase 1 transcript=eq;prot=eq; + 3 No
BD3G09920 bdi serine-type peptidase activity (Blast2GO) pid=Bradi3g09920.1;tid=Bradi3g09920.1;GeneName=Bradi3g09920;transcript=eq;prot=eq + Bd3 No
CP00023G00780 cpa name=evm.TU.supercontig_23.78;pid=evm.TU.supercontig_23.78;prot=eq;transcript=eq - supercontig_23 No
CR07G06700 cre name=estExt_fgenesh2_kg.C_160040;pid=183472;prot=eq;tid=183472;transcript=eq + chromosome_7 No
FV1G06890 fve Chloroplast processing peptidase, Precursor (similar to) transcript=eq;prot=eq;pid=gene30908 - LG1 No
GM05G35480 gma 05 pid=16260794;transcript=eq;prot=eq;name=Glyma05g35480.1 + Gm05 No
GM08G04250 gma 08 pid=16269910;transcript=eq;prot=eq;name=Glyma08g04250.1 - Gm08 No
MD00G224310 mdo transcript=eq;prot=eq;pid=MDP0000292108;tid=MDP0000292108;contig=MDC009706.408 - MDC009706.408 No
MD02G004370 mdo transcript=eq;prot=eq;pid=MDP0000232493;tid=MDP0000232493;contig=MDC004282.242 - 2 No
ME07670G00130 mes PACid=17988059;RNAname=cassava4.1_011244m;GeneName=cassava4.1_011244m.g;transcript=ne;prot=eq + scaffold07670 No
MRCC299_11G02610 mrcc299 name=e_gw2.11.347.1;pid=86755;prot=eq;tid=86755;transcript=eq - Chr_11 No
MT8G103160 mtr Chloroplast processing peptidase (AHRD V1 ***- Q8H0W1); contains Interpro domain(s) IPR000223 Peptidase S26A, signal peptidase I transcript=eq;prot=eq;pid=Medtr8g103160.1; - 8 No
MT8G103470 mtr Chloroplast processing peptidase (AHRD V1 ***- Q8H0W1); contains Interpro domain(s) IPR000223 Peptidase S26A, signal peptidase I transcript=eq;prot=eq;pid=Medtr8g103470.1; - 8 No
OL04G02070 olu NULL name=gwEuk.4.393.1,pid=5885,prot=eq,tid=5885 + Chr_4 No
OS02G16709 osa peptidase, putative, expressed transcript=eq;prot=eq; + 2 No
PP00009G02310 ppa NULL name=gw1.9.114.1,pid=25133,prot=eq,tid=25133 + scaffold_9 No
PP00010G01390 ppa NULL name=gw1.10.112.1,pid=25547,prot=eq,tid=25547 - scaffold_10 No
PP00156G00280 ppa NULL name=gw1.156.126.1,pid=46169,prot=eq,tid=46169 - scaffold_156 No
PT06G15920 ptr PACid=17306244;name=POPTR_0006s16300;alias=pt018389m; transcript=eq;prot=eq;protein_id=17306244; + scaffold_6 No
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