Sub-family 
- Id
- ORTHO003805
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM003707
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (1 gene)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- cre
- Chlamydomonas reinhardtii (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (2 genes)
- lja
- Lotus japonicus (1 gene)
- mdo
- Malus domestica (3 genes)
- mes
- Manihot esculenta (1 gene)
- mrcc299
- Micromonas sp. RCC299 (1 gene)
- mtr
- Medicago truncatula (1 gene)
- olu
- Ostreococcus lucimarinus (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ota
- Ostreococcus tauri (1 gene)
- ppa
- Physcomitrella patens (1 gene)
- ptr
- Populus trichocarpa (1 gene)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (1 gene)
- vca
- Volvox carteri (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (1 gene)
The gene family ORTHO003805 has 28 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO003805
Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL2G26980 | aly | name=scaffold_202765.1;pid=895691;prot=eq;tid=927204 | - | scaffold_2 | No | |
| AT1G78010 | ath | tRNA modification GTPase, putative; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: small GTPase mediated signal transduction, tRNA modification; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), tRNA modification GTPase TrmE (InterPro:IPR004520), GTP-binding protein TrmE, N-terminal (InterPro:IPR018948), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G12080.1); Has 37224 Blast hits to 31482 proteins in 3092 species: Archae - 387; Bacteria - 27903; Metazoa - 467; Fungi - 287; Plants - 322; Viruses - 0; Other Eukaryotes - 7858 (source: NCBI BLink).;tRNA modification GTPase, putative | transcript=eq;prot=eq; | + | 1 | No |
| BD3G35517 | bdi | pid=Bradi3g35517.1;tid=Bradi3g35517.1;GeneName=Bradi3g35517;transcript=eq;prot=eq | + | Bd3 | No | |
| CP00066G00830 | cpa | name=evm.TU.supercontig_66.83;pid=evm.TU.supercontig_66.83;prot=eq;transcript=eq | - | supercontig_66 | No | |
| CR01G14230 | cre | name=e_gwW.42.6.1;pid=121098;prot=eq;tid=121098;transcript=eq | - | chromosome_1 | No | |
| FV5G18690 | fve | tRNA modification GTPase mnmE (probable) | transcript=eq;prot=eq;pid=gene22076 | + | LG5 | No |
| GM04G11560 | gma | 04 | pid=16255650;transcript=eq;prot=eq;name=Glyma04g11560.1 | - | Gm04 | No |
| GM06G11130 | gma | 06 | pid=16262516;transcript=eq;prot=eq;name=Glyma06g11130.1 | - | Gm06 | No |
| LJ0G316440 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_110636;name=LjSGA_110636.1 | - | LjSGA_110636 | No | |
| MD00G266850 | mdo | transcript=eq;prot=eq;pid=MDP0000290966;tid=MDP0000290966;contig=MDC011441.302 | - | MDC011441.302 | No | |
| MD00G266860 | mdo | transcript=eq;prot=eq;pid=MDP0000250703;tid=MDP0000250703;contig=MDC011441.314 | - | MDC011441.314 | No | |
| MD06G019680 | mdo | transcript=eq;prot=eq;pid=MDP0000126844;tid=MDP0000126844;contig=MDC012172.316 | + | 6 | No | |
| ME12455G00560 | mes | PACid=17971823;RNAname=cassava4.1_028292m;GeneName=cassava4.1_028292m.g;transcript=eq;prot=eq | - | scaffold12455 | No | |
| MRCC299_08G01240 | mrcc299 | name=EuGene.0800010123;pid=60555;prot=eq;tid=60555;transcript=eq | - | Chr_08 | No | |
| MT0G40890 | mtr | tRNA modification GTPase mnmE (AHRD V1 ***- Q8KPU2); contains Interpro domain(s) IPR004520 tRNA modification GTPase TrmE | transcript=eq;prot=eq;pid=CU651589_4.1; | + | CU651589.4 | No |
| OL06G04050 | olu | NULL | name=estExt_Genewise_ext.C_Chr_60325,pid=49818,prot=eq,tid=49818 | + | Chr_6 | No |
| OS08G31460 | osa | GTPase of unknown function domain containing protein, putative, expressed | transcript=eq;prot=eq; | + | 8 | No |
| OSINDICA_08G29550 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC026694; | + | Chr08 | No |
| OT02G02780 | ota | COG0486: Predicted GTPase (ISS); | name=OT02G02780;protein_id=CAL52163.1;prot=eq | + | chrom02 | No |
| PP00005G00550 | ppa | NULL | name=fgenesh1_pg.scaffold_5000058,pid=65194,prot=eq,tid=65194 | + | scaffold_5 | No |