Sub-family  

Parent family
HOM000094
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO003766 has 28 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G44830 aly name=fgenesh2_kg.1__4118__AT1G50370.1;pid=474164;prot=eq;tid=474164 + scaffold_1 No
AL3G21780 aly name=fgenesh2_kg.3__2217__AT3G19980.1;pid=479516;prot=eq;tid=479516 + scaffold_3 No
AT1G50370 ath Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: flower-specific, phytochrome-associated protein phosphatase 3 (TAIR:AT3G19980.1); Has 6872 Blast hits to 6704 proteins in 524 species: Archae - 81; Bacteria - 295; Metazoa - 2372; Fungi - 1410; Plants - 974; Viruses - 10; Other Eukaryotes - 1730 (source: NCBI BLink).;Calcineurin-like metallo-phosphoesterase superfamily protein transcript=eq;prot=eq; + 1 No
AT3G19980 ath Encodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype.;flower-specific, phytochrome-associated protein phosphatase 3 transcript=eq;prot=eq; + 3 No
BD2G17570 bdi NF-kappaB-inducing kinase activity, myosin phosphatase activity (Blast2GO) pid=Bradi2g17570.1;tid=Bradi2g17570.1;GeneName=Bradi2g17570;transcript=eq;prot=eq + Bd2 No
CR06G12450 cre name=Chlre2_kg.scaffold_12000061;pid=144867;prot=eq;tid=144867;transcript=eq + chromosome_6 No
FV4G23070 fve Phytochrome-associated serine/threonine protein phosphatase transcript=eq;prot=eq;pid=gene00774 + LG4 No
GM10G43470 gma 10 pid=16281991;transcript=eq;prot=eq;name=Glyma10g43470.1 + Gm10 No
GM20G23310 gma 20 pid=16316539;transcript=eq;prot=eq;name=Glyma20g23310.1 - Gm20 No
LJ5G031590 lja prot=eq;transcript=eq;scaffold=CM0180;name=chr5.CM0180.170.nc - chr5 No
MD16G007880 mdo transcript=eq;prot=eq;pid=MDP0000060858;tid=MDP0000060858;contig=MDC018131.78 + 16 No
ME05875G02520 mes PACid=17973222;RNAname=cassava4.1_012640m;GeneName=cassava4.1_012640m.g;transcript=eq;prot=eq + scaffold05875 No
MRCC299_03G07590 mrcc299 name=EuGene.0300010789;pid=57361;prot=eq;tid=57361;transcript=eq + Chr_03 No
MT1G039380 mtr Serine/threonine-protein phosphatase (AHRD V1 **** B9HK17_POPTR); contains Interpro domain(s) IPR006186 Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase transcript=eq;prot=eq;pid=Medtr1g039380.1; + 1 No
OL17G01170 olu NULL name=e_gwEuk.17.149.1,pid=42032,prot=eq,tid=42032 + Chr_17 No
OS01G49690 osa Ser%2FThr protein phosphatase family protein, putative, expressed transcript=eq;prot=eq; + 1 No
OT18G01240 ota serine/threonine protein phosphatase 2A (ISS); name=OT18G01240;protein_id=CAL58571.1;prot=eq + chrom18 No
PP00031G01250 ppa NULL name=estExt_Genewise1.C_310177,pid=206051,prot=eq,tid=206051 + scaffold_31 No
PP00207G00210 ppa NULL name=estExt_gwp_gw1.C_2070045,pid=193894,prot=eq,tid=193894 - scaffold_207 No
PT08G00200 ptr PACid=17320801;name=POPTR_0008s00390;alias=pt027507m,Pt-ATFYPP3.2,estExt_fgenesh4_pg.C_LG_VIII0018; transcript=eq;prot=eq;protein_id=17320801; + scaffold_8 No
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