Sub-family  

Parent family
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (2 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (14 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)



The gene family ORTHO003756 has 28 genes in 8 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G37770 aly name=Al_scaffold_0001_3717;pid=881950;prot=eq;tid=913463 - scaffold_1 No
AL5G08300 aly name=Al_scaffold_0005_793;pid=865314;prot=eq;tid=896827 - scaffold_5 No
AL5G15030 aly name=Al_scaffold_0005_1443;pid=865964;prot=eq;tid=897477 + scaffold_5 No
AT1G40390 ath DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G43760.1); Has 796 Blast hits to 793 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 796; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;DNAse I-like superfamily protein transcript=eq;prot=eq; - 1 No
AT1G43760 ath DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G40390.1); Has 1816 Blast hits to 1744 proteins in 56 species: Archae - 0; Bacteria - 6; Metazoa - 164; Fungi - 4; Plants - 1633; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).;DNAse I-like superfamily protein transcript=eq;prot=eq; - 1 No
CP00114G00250 cpa name=evm.TU.supercontig_114.25;pid=evm.TU.supercontig_114.25;prot=eq;transcript=eq + supercontig_114 No
CP00193G00130 cpa name=evm.TU.supercontig_193.13;pid=evm.TU.supercontig_193.13;prot=eq;transcript=eq - supercontig_193 No
FV1G21730 fve Endonuclease (probable) transcript=eq;prot=eq;pid=gene24551 - LG1 No
FV1G26180 fve 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (probable) transcript=eq;prot=eq;pid=gene20717 - LG1 No
FV2G01550 fve Putative ribonuclease H protein At1g65750 (probable) transcript=eq;prot=eq;pid=gene25252 + LG2 No
FV2G07120 fve Stress response protein nst1 (probable) transcript=eq;prot=eq;pid=gene07629 + LG2 No
FV2G30720 fve Ataxin-2 (probable) transcript=eq;prot=eq;pid=gene10987 + LG2 No
FV3G21300 fve Regulatory protein E2 (probable) transcript=eq;prot=eq;pid=gene07784 - LG3 No
FV4G16050 fve Putative ribonuclease H protein At1g65750 (probable) transcript=eq;prot=eq;pid=gene06134 - LG4 No
FV4G20790 fve Methionyl-tRNA synthetase (MetRS) (probable) transcript=eq;prot=eq;pid=gene23071 + LG4 No
FV6G11460 fve hypothetical protein transcript=eq;prot=eq;pid=gene18772 + LG6 No
FV6G31970 fve hypothetical protein transcript=eq;prot=eq;pid=gene15510 - LG6 No
FV6G38960 fve Cell division control protein 2 homolog D (probable) transcript=eq;prot=eq;pid=gene26262 - LG6 No
FV7G12980 fve RNA polymerase-associated protein rapA (probable) transcript=eq;prot=eq;pid=gene04893 + LG7 No
FV7G20600 fve hypothetical protein transcript=eq;prot=eq;pid=gene05327 + LG7 No
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