Sub-family  

Parent family
HOM000837
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO003750 has 28 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G33490 aly name=fgenesh2_kg.1__3367__AT1G32230.1;pid=473413;prot=eq;tid=473413 + scaffold_1 No
AL4G20880 aly name=fgenesh2_kg.4__1571__AT2G35510.1;pid=482511;prot=eq;tid=482511 - scaffold_4 No
AT1G32230 ath Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.;WWE protein-protein interaction domain protein family transcript=eq;prot=eq; + 1 No
AT2G35510 ath Encodes a WWE domain-containing protein with 76% similarity to RCD1. The protein also contains a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.;similar to RCD one 1 transcript=eq;prot=eq; - 2 No
BD3G34250 bdi NAD+ ADP-ribosyltransferase activity (Blast2GO) pid=Bradi3g34250.1;tid=Bradi3g34250.1;GeneName=Bradi3g34250;transcript=eq;prot=eq - Bd3 No
CP00208G00090 cpa name=evm.TU.supercontig_208.9;pid=evm.TU.supercontig_208.9;prot=eq;transcript=eq + supercontig_208 No
FV0G29710 fve Poly [ADP-ribose] polymerase 15 (PARP-15) (probable) transcript=eq;prot=eq;pid=gene13736 + scf0513178 No
FV0G29730 fve Poly [ADP-ribose] polymerase 14 (PARP-14) (probable) transcript=eq;prot=eq;pid=gene13738 + scf0513178 No
GM01G01900 gma 01 pid=16243088;transcript=eq;prot=eq;name=Glyma01g01900.1 - Gm01 No
GM09G34000 gma 09 pid=16277112;transcript=eq;prot=eq;name=Glyma09g34000.1 + Gm09 No
LJ0G006150 lja prot=eq;transcript=eq;scaffold=LjSGA_005932;name=LjSGA_005932.1 + LjSGA_005932 No
LJ0G460370 lja prot=eq;transcript=eq;scaffold=LjT41N19;name=LjT41N19.60.nd - chr0 No
LJ4G012100 lja prot=eq;transcript=eq;scaffold=CM0283;name=chr4.CM0283.50.nc - chr4 No
MD02G024610 mdo transcript=eq;prot=eq;pid=MDP0000232873;tid=MDP0000232873;contig=MDC018041.243 + 2 No
MD07G005090 mdo transcript=eq;prot=eq;pid=MDP0000234325;tid=MDP0000234325;contig=MDC006553.299 - 7 No
ME00999G00030 mes PACid=17968595;RNAname=cassava4.1_003468m;GeneName=cassava4.1_003468m.g;transcript=eq;prot=eq - scaffold00999 No
ME04321G00010 mes PACid=17990526;RNAname=cassava4.1_025537m;GeneName=cassava4.1_025537m.g;transcript=eq;prot=eq + scaffold04321 No
MT5G032190 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004170 WWE domain transcript=eq;prot=eq;pid=Medtr5g032190.1; + 5 No
MT7G011550 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR012317 Poly(ADP-ribose) polymerase, catalytic region transcript=eq;prot=eq;pid=Medtr7g011550.1; - 7 No
OS10G42710 osa RCD1, putative, expressed transcript=eq;prot=eq; - 10 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier