Sub-family  

Parent family
HOM000859
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO003572 has 29 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G36800 aly name=scaffold_603813.1;pid=911756;prot=eq;tid=943269 - scaffold_6 No
AT4G04950 ath thioredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G32580.1); Has 26535 Blast hits to 17137 proteins in 2757 species: Archae - 249; Bacteria - 14010; Metazoa - 1647; Fungi - 1426; Plants - 1759; Viruses - 3; Other Eukaryotes - 7441 (source: NCBI BLink).;thioredoxin family protein transcript=eq;prot=eq; - 4 No
BD3G30080 bdi protein kinase C binding (Blast2GO) pid=Bradi3g30080.1;tid=Bradi3g30080.1;GeneName=Bradi3g30080;transcript=eq;prot=eq + Bd3 No
CP00027G00460 cpa name=evm.TU.supercontig_27.47;pid=evm.TU.supercontig_27.47;prot=eq;transcript=eq - supercontig_27 No
CR32G00090 cre name=STE_estExt_GenewiseH_1.C_940006;pid=195766;prot=eq;tid=195766;transcript=eq - scaffold_32 No
FV3G15940 fve Monothiol glutaredoxin-S17 (AtGrxS17) (putative) transcript=eq;prot=eq;pid=gene02410 - LG3 No
GM13G24880 gma 13 pid=16291466;transcript=eq;prot=eq;name=Glyma13g24880.1 - Gm13 No
LJ0G074860 lja prot=eq;transcript=eq;scaffold=LjSGA_025356;name=LjSGA_025356.1 + LjSGA_025356 No
MD05G004220 mdo transcript=eq;prot=eq;pid=MDP0000302965;tid=MDP0000302965;contig=MDC018508.113 + 5 No
MD10G023710 mdo transcript=eq;prot=eq;pid=MDP0000898292;tid=MDP0000898292;contig=MDC001128.127 - 10 No
ME09000G00030 mes PACid=17990854;RNAname=cassava4.1_006307m;GeneName=cassava4.1_006307m.g;transcript=eq;prot=eq - scaffold09000 No
MRCC299_14G03210 mrcc299 name=gw2.14.255.1;pid=70483;prot=eq;tid=70483;transcript=eq - Chr_14 No
MT0G23910 mtr Monothiol glutaredoxin-S17 (AHRD V1 ***- Q9ZPH2); contains Interpro domain(s) IPR004480 Glutaredoxin-related protein transcript=eq;prot=eq;pid=AC233659_13.1; - AC233659.1 No
OL09G01950 olu NULL name=gwEuk.9.307.1,pid=5638,prot=eq,tid=5638 + Chr_9 No
OS10G35720 osa OsGrx%5FS17 %2D glutaredoxin subgroup II, expressed transcript=eq;prot=eq; + 10 No
OSINDICA_10G26480 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC031334; + Chr10 No
OT09G02080 ota Glutaredoxin-related protein (ISS); name=OT09G02080;protein_id=CAL55367.1;prot=eq + chrom09 No
PP00051G00890 ppa NULL name=estExt_Genewise1.C_510104,pid=209059,prot=eq,tid=209059 + scaffold_51 No
PP00079G00750 ppa NULL name=e_gw1.79.39.1,pid=129864,prot=eq,tid=129864 + scaffold_79 No
PP00126G00370 ppa NULL name=fgenesh2_pm.scaffold_126000004,pid=232701,prot=eq,tid=232701 - scaffold_126 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier