Sub-family  

Parent family
HOM000072
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO003520 has 29 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G05300 aly name=scaffold_600542.1;pid=908485;prot=eq;tid=939998 - scaffold_6 No
AT5G05690 ath Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses.;Cytochrome P450 superfamily protein transcript=eq;prot=eq; - 5 No
BD4G43110 bdi pid=Bradi4g43110.1;tid=Bradi4g43110.1;GeneName=Bradi4g43110;transcript=eq;prot=eq + Bd4 No
CP00019G01800 cpa name=evm.TU.supercontig_19.181;pid=evm.TU.supercontig_19.181;prot=eq;transcript=eq - supercontig_19 No
FV7G29380 fve Cytochrome P450 90A1 (similar to) transcript=eq;prot=eq;pid=gene20962 + LG7 No
GM02G42390 gma 02 pid=16249909;transcript=eq;prot=eq;name=Glyma02g42390.1 + Gm02 No
GM11G35150 gma 11 pid=16285444;transcript=eq;prot=eq;name=Glyma11g35150.1 + Gm11 No
GM14G06530 gma 14 pid=16294582;transcript=eq;prot=eq;name=Glyma14g06530.1 - Gm14 No
MD01G014640 mdo transcript=eq;prot=eq;pid=MDP0000127773;tid=MDP0000127773;contig=MDC013427.515 + 1 No
MD04G001800 mdo transcript=eq;prot=eq;pid=MDP0000313816;tid=MDP0000313816;contig=MDC023485.14 + 4 No
ME08265G03170 mes PACid=17988647;RNAname=cassava4.1_006864m;GeneName=cassava4.1_006864m.g;transcript=eq;prot=eq + scaffold08265 No
MT3G070380 mtr Cytochrome P450 (AHRD V1 ***- Q9LKH7_9FABA); contains Interpro domain(s) IPR002401 Cytochrome P450, E-class, group I transcript=eq;prot=eq;pid=Medtr3g070380.1; + 3 No
MT5G082520 mtr Cytochrome P450 (AHRD V1 ***- Q9LKH7_9FABA); contains Interpro domain(s) IPR002401 Cytochrome P450, E-class, group I transcript=eq;prot=eq;pid=Medtr5g082520.1; + 5 No
OS11G04710 osa cytochrome P450, putative, expressed transcript=eq;prot=eq; - 11 No
OS12G04480 osa cytochrome P450, putative, expressed transcript=eq;prot=eq; - 12 No
OSINDICA_11G03200 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC034136; - Chr11 No
OSINDICA_12G03440 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC032072; - Chr12 No
PP00024G01470 ppa NULL name=fgenesh1_pg.scaffold_24000152,pid=69760,prot=eq,tid=69760 + scaffold_24 No
PP00083G00380 ppa NULL name=e_gw1.83.204.1,pid=130455,prot=eq,tid=130455 - scaffold_83 No
PP00281G00430 ppa NULL name=e_gw1.281.24.1,pid=148664,prot=eq,tid=148664 + scaffold_281 No
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