Sub-family 
- Id
- ORTHO003520
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000072
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (1 gene)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (3 genes)
- mdo
- Malus domestica (2 genes)
- mes
- Manihot esculenta (1 gene)
- mtr
- Medicago truncatula (2 genes)
- osa
- Oryza sativa ssp. japonica (2 genes)
- osaindica
- Oryza sativa ssp. indica (2 genes)
- ppa
- Physcomitrella patens (3 genes)
- ptr
- Populus trichocarpa (2 genes)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (2 genes)
The gene family ORTHO003520 has 29 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO003520
Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL6G05300 | aly | name=scaffold_600542.1;pid=908485;prot=eq;tid=939998 | - | scaffold_6 | No | |
| AT5G05690 | ath | Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses.;Cytochrome P450 superfamily protein | transcript=eq;prot=eq; | - | 5 | No |
| BD4G43110 | bdi | pid=Bradi4g43110.1;tid=Bradi4g43110.1;GeneName=Bradi4g43110;transcript=eq;prot=eq | + | Bd4 | No | |
| CP00019G01800 | cpa | name=evm.TU.supercontig_19.181;pid=evm.TU.supercontig_19.181;prot=eq;transcript=eq | - | supercontig_19 | No | |
| FV7G29380 | fve | Cytochrome P450 90A1 (similar to) | transcript=eq;prot=eq;pid=gene20962 | + | LG7 | No |
| GM02G42390 | gma | 02 | pid=16249909;transcript=eq;prot=eq;name=Glyma02g42390.1 | + | Gm02 | No |
| GM11G35150 | gma | 11 | pid=16285444;transcript=eq;prot=eq;name=Glyma11g35150.1 | + | Gm11 | No |
| GM14G06530 | gma | 14 | pid=16294582;transcript=eq;prot=eq;name=Glyma14g06530.1 | - | Gm14 | No |
| MD01G014640 | mdo | transcript=eq;prot=eq;pid=MDP0000127773;tid=MDP0000127773;contig=MDC013427.515 | + | 1 | No | |
| MD04G001800 | mdo | transcript=eq;prot=eq;pid=MDP0000313816;tid=MDP0000313816;contig=MDC023485.14 | + | 4 | No | |
| ME08265G03170 | mes | PACid=17988647;RNAname=cassava4.1_006864m;GeneName=cassava4.1_006864m.g;transcript=eq;prot=eq | + | scaffold08265 | No | |
| MT3G070380 | mtr | Cytochrome P450 (AHRD V1 ***- Q9LKH7_9FABA); contains Interpro domain(s) IPR002401 Cytochrome P450, E-class, group I | transcript=eq;prot=eq;pid=Medtr3g070380.1; | + | 3 | No |
| MT5G082520 | mtr | Cytochrome P450 (AHRD V1 ***- Q9LKH7_9FABA); contains Interpro domain(s) IPR002401 Cytochrome P450, E-class, group I | transcript=eq;prot=eq;pid=Medtr5g082520.1; | + | 5 | No |
| OS11G04710 | osa | cytochrome P450, putative, expressed | transcript=eq;prot=eq; | - | 11 | No |
| OS12G04480 | osa | cytochrome P450, putative, expressed | transcript=eq;prot=eq; | - | 12 | No |
| OSINDICA_11G03200 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC034136; | - | Chr11 | No |
| OSINDICA_12G03440 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC032072; | - | Chr12 | No |
| PP00024G01470 | ppa | NULL | name=fgenesh1_pg.scaffold_24000152,pid=69760,prot=eq,tid=69760 | + | scaffold_24 | No |
| PP00083G00380 | ppa | NULL | name=e_gw1.83.204.1,pid=130455,prot=eq,tid=130455 | - | scaffold_83 | No |
| PP00281G00430 | ppa | NULL | name=e_gw1.281.24.1,pid=148664,prot=eq,tid=148664 | + | scaffold_281 | No |