Sub-family  

Parent family
HOM000171
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO003491 has 29 genes in 21 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G21050 aly name=scaffold_502193.1;pid=906489;prot=eq;tid=938002 + scaffold_5 No
AT3G51390 ath DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G56930.1); Has 4950 Blast hits to 4948 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2153; Fungi - 685; Plants - 832; Viruses - 0; Other Eukaryotes - 1280 (source: NCBI BLink).;DHHC-type zinc finger family protein transcript=eq;prot=eq; + 3 No
BD3G51190 bdi protein-cysteine S-palmitoleyltransferase activity (Blast2GO) pid=Bradi3g51190.1;tid=Bradi3g51190.1;GeneName=Bradi3g51190;transcript=eq;prot=eq - Bd3 No
FV1G12550 fve Probable S-acyltransferase At3g51390 (similar to) transcript=eq;prot=eq;pid=gene13083 - LG1 No
FV6G14360 fve Probable S-acyltransferase At3g51390 transcript=eq;prot=eq;pid=gene18111 - LG6 No
GM11G08760 gma 11 pid=16283172;transcript=eq;prot=eq;name=Glyma11g08760.1 + Gm11 No
LJ2G021940 lja partial;prot=eq;transcript=eq;scaffold=CM0272;name=chr2.CM0272.270.nd - chr2 No
MD00G363430 mdo transcript=eq;prot=eq;pid=MDP0000251588;tid=MDP0000251588;contig=MDC016339.124 + MDC016339.124 No
MD02G010660 mdo transcript=eq;prot=eq;pid=MDP0000239791;tid=MDP0000239791;contig=MDC009483.39 - 2 No
ME04177G00120 mes PACid=17978130;RNAname=cassava4.1_026726m;GeneName=cassava4.1_026726m.g;transcript=eq;prot=eq - scaffold04177 No
ME04177G00130 mes PACid=17978126;RNAname=cassava4.1_028697m;GeneName=cassava4.1_028697m.g;transcript=eq;prot=eq - scaffold04177 No
MRCC299_02G07350 mrcc299 name=est_cluster_kg.Chr_02__49__3199075:1;pid=107685;prot=eq;tid=107685;transcript=eq - Chr_02 No
MT5G023230 mtr Palmitoyltransferase ERF2 (AHRD V1 *-*- Q750R7); contains Interpro domain(s) IPR001594 Zinc finger, DHHC-type transcript=eq;prot=eq;pid=Medtr5g023230.1; + 5 No
OL10G01260 olu NULL name=eugene.1000010123,pid=26089,prot=eq,tid=26089 + Chr_10 No
OS04G47410 osa DHHC zinc finger domain containing protein, expressed transcript=eq;prot=eq; + 4 No
OS12G29560 osa DHHC zinc finger domain containing protein, expressed transcript=eq;prot=eq; + 12 No
OSINDICA_04G39630 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC018461; + Chr04 No
OT10G01240 ota DHHC-type Zn-finger proteins (ISS); name=OT10G01240;protein_id=CAL56081.1;prot=eq + chrom10 No
PP00063G00920 ppa NULL name=estExt_gwp_gw1.C_630091,pid=183177,prot=eq,tid=183177 - scaffold_63 No
PP00080G00730 ppa NULL name=e_gw1.80.60.1,pid=130130,prot=eq,tid=130130 - scaffold_80 No
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