Sub-family  

Parent family
HOM000569
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO003485 has 29 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G13480 aly name=fgenesh2_kg.5__922__AT3G45400.1;pid=484930;prot=eq;tid=484930 + scaffold_5 No
AT3G45400 ath exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G03650.1); Has 1358 Blast hits to 1353 proteins in 108 species: Archae - 0; Bacteria - 4; Metazoa - 218; Fungi - 4; Plants - 1054; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).;exostosin family protein transcript=eq;prot=eq; + 3 No
BD1G63740 bdi Similar to arabinosyltransferase. CAZy family GT47 pid=Bradi1g63740.1;tid=Bradi1g63740.1;GeneName=Bradi1g63740;Name=BdGT47B2;transcript=eq;prot=eq - Bd1 No
CP00073G00110 cpa name=evm.TU.supercontig_73.11;pid=evm.TU.supercontig_73.11;prot=eq;transcript=eq + supercontig_73 No
FV4G15740 fve Multiple exostoses homolog 1 (probable) transcript=eq;prot=eq;pid=gene06060 - LG4 No
GM01G07060 gma 01 pid=16243671;transcript=eq;prot=eq;name=Glyma01g07060.1 - Gm01 No
GM03G00910 gma 03 pid=16250710;transcript=eq;prot=eq;name=Glyma03g00910.1 - Gm03 No
GM19G29730 gma 19 pid=16313218;transcript=eq;prot=eq;name=Glyma19g29730.1 + Gm19 No
MD00G175810 mdo transcript=eq;prot=eq;pid=MDP0000282146;tid=MDP0000282146;contig=MDC007530.288 + MDC007530.288 No
MD12G001400 mdo transcript=eq;prot=eq;pid=MDP0000558976;tid=MDP0000558976;contig=MDC002037.232 + 12 No
ME03614G01800 mes PACid=17965672;RNAname=cassava4.1_032917m;GeneName=cassava4.1_032917m.g;transcript=eq;prot=eq - scaffold03614 No
ME06859G00030 mes PACid=17965493;RNAname=cassava4.1_006323m;GeneName=cassava4.1_006323m.g;transcript=eq;prot=eq + scaffold06859 No
MT7G087100 mtr Secondary cell wall-related glycosyltransferase family 47 (AHRD V1 **-- Q5BM99_9ROSI); contains Interpro domain(s) IPR004263 Exostosin-like transcript=eq;prot=eq;pid=Medtr7g087100.1; + 7 No
OS03G20850 osa exostosin family domain containing protein, expressed transcript=eq;prot=eq; + 3 No
OSINDICA_03G19840 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC006329; + Chr03 No
PP00030G00850 ppa NULL name=e_gw1.30.67.1,pid=119709,prot=eq,tid=119709 - scaffold_30 No
PP00039G00740 ppa NULL name=gw1.39.101.1,pid=22921,prot=eq,tid=22921 - scaffold_39 No
PP00045G01150 ppa NULL name=estExt_fgenesh1_pm.C_450022,pid=105690,prot=eq,tid=105690 + scaffold_45 No
PP00048G00650 ppa NULL name=gw1.48.63.1,pid=23082,prot=eq,tid=23082 - scaffold_48 No
PP00169G00420 ppa NULL name=fgenesh1_pm.scaffold_169000009,pid=59465,prot=eq,tid=59465 + scaffold_169 No
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