Sub-family  

Parent family
HOM000161
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (3 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (3 genes)



The gene family ORTHO003452 has 29 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G14920 aly name=fgenesh1_pm.C_scaffold_4000841;pid=320784;prot=eq;tid=320784 + scaffold_4 No
AT2G30300 ath Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G01630.1); Has 1130 Blast hits to 1113 proteins in 261 species: Archae - 8; Bacteria - 316; Metazoa - 4; Fungi - 113; Plants - 577; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; + 2 No
BD2G22400 bdi pid=Bradi2g22400.1;tid=Bradi2g22400.1;GeneName=Bradi2g22400;transcript=eq;prot=eq - Bd2 No
BD2G53700 bdi carboxylic acid transmembrane transporter activity (Blast2GO) pid=Bradi2g53700.1;tid=Bradi2g53700.1;GeneName=Bradi2g53700;transcript=eq;prot=eq - Bd2 No
CP01629G00010 cpa name=evm.TU.supercontig_1629.1;pid=evm.TU.supercontig_1629.1;prot=eq;warning=only partially equal protein - supercontig_1629 No
FV2G17960 fve Probable transporter MCH1 transcript=eq;prot=eq;pid=gene01722 - LG2 No
FV3G31870 fve Probable transporter mch1 transcript=eq;prot=eq;pid=gene28158 - LG3 No
GM02G39950 gma 02 pid=16249627;transcript=eq;prot=eq;name=Glyma02g39950.1 + Gm02 No
GM11G29810 gma 11 pid=16284929;transcript=eq;prot=eq;name=Glyma11g29810.1 + Gm11 No
GM18G06280 gma 18 pid=16308085;transcript=eq;prot=eq;name=Glyma18g06280.1 - Gm18 No
LJ0G040570 lja prot=eq;transcript=eq;scaffold=LjSGA_016689;name=LjSGA_016689.1 + LjSGA_016689 No
LJ2G031140 lja partial;prot=eq;transcript=eq;scaffold=CM0058;name=chr2.CM0058.290.nd - chr2 No
MD03G004430 mdo transcript=eq;prot=eq;pid=MDP0000218910;tid=MDP0000218910;contig=MDC020525.273 + 3 No
MD11G004740 mdo transcript=eq;prot=eq;pid=MDP0000134603;tid=MDP0000134603;contig=MDC000379.168 + 11 No
ME03581G00720 mes PACid=17975773;RNAname=cassava4.1_029159m;GeneName=cassava4.1_029159m.g;transcript=eq;prot=eq + scaffold03581 No
OS01G61010 osa nodulin, putative, expressed transcript=eq;prot=eq; - 1 No
OS05G39800 osa NFD4, putative, expressed transcript=eq;prot=eq; + 5 No
OSINDICA_01G57660 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC003878; - Chr01 No
OSINDICA_05G35630 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC021561; + Chr05 No
PT13G14440 ptr PACid=17329783;name=POPTR_0013s15010;alias=pt030568m,fgenesh4_pm.C_LG_XIII000459; transcript=eq;prot=eq;protein_id=17329783; + scaffold_13 No
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