Sub-family  

Parent family
HOM000040
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (4 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family ORTHO003424 has 29 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G31990 aly name=scaffold_303423.1;pid=899453;prot=eq;tid=930966 + scaffold_3 No
AL6G39440 aly name=fgenesh1_pm.C_scaffold_6002815;pid=327595;prot=eq;tid=327595 + scaffold_6 No
AT4G02050 ath sugar transporter protein 7 (STP7); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G26340.1); Has 26348 Blast hits to 25870 proteins in 1897 species: Archae - 376; Bacteria - 11847; Metazoa - 3711; Fungi - 6732; Plants - 2516; Viruses - 0; Other Eukaryotes - 1166 (source: NCBI BLink).;sugar transporter protein 7 transcript=eq;prot=eq; - 4 No
BD4G30290 bdi glucose transmembrane transporter activity, galactose transmembrane transporter activity, sugar:hydrogen symporter activity, fructose transmembrane transporter activity, mannose transmembrane transporter activity (Blast2GO) pid=Bradi4g30290.1;tid=Bradi4g30290.1;GeneName=Bradi4g30290;transcript=eq;prot=eq + Bd4 No
FV1G03540 fve Sugar carrier protein A (similar to) transcript=eq;prot=eq;pid=gene30855 - LG1 No
GM15G24710 gma 15 pid=16299781;transcript=eq;prot=eq;name=Glyma15g24710.1 + Gm15 No
LJ6G009110 lja prot=eq;transcript=eq;scaffold=CM0037;name=chr6.CM0037.1160.nc - chr6 No
MD00G265050 mdo transcript=eq;prot=eq;pid=MDP0000258256;tid=MDP0000258256;contig=MDC011367.227 + MDC011367.227 No
MD00G265790 mdo transcript=eq;prot=eq;pid=MDP0000187438;tid=MDP0000187438;contig=MDC011404.79 + MDC011404.79 No
MD00G269060 mdo transcript=eq;prot=eq;pid=MDP0000240921;tid=MDP0000240921;contig=MDC011525.68 - MDC011525.68 No
MD15G008990 mdo transcript=eq;prot=eq;pid=MDP0000192591;tid=MDP0000192591;contig=MDC011367.314 - 15 No
ME08686G00220 mes PACid=17972709;RNAname=cassava4.1_005708m;GeneName=cassava4.1_005708m.g;transcript=eq;prot=eq - scaffold08686 No
MT4G116770 mtr Hexose transporter 3 (AHRD V1 **** D0EXE0_SOLLC); contains Interpro domain(s) IPR003663 Sugar/inositol transporter transcript=eq;prot=eq;pid=Medtr4g116770.1; + 4 No
MT4G116790 mtr Sugar carrier protein A (AHRD V1 ***- B6TMZ9_MAIZE); contains Interpro domain(s) IPR003663 Sugar/inositol transporter transcript=eq;prot=eq;pid=Medtr4g116790.1; + 4 No
MT4G116800 mtr Transmembrane 9 superfamily protein member 2 (AHRD V1 *--- B6ST61_MAIZE); contains Interpro domain(s) IPR003663 Sugar/inositol transporter transcript=eq;prot=eq;pid=Medtr4g116800.1; + 4 No
MT5G094760 mtr Hexose transporter 3 (AHRD V1 **** D0EXE0_SOLLC); contains Interpro domain(s) IPR003663 Sugar/inositol transporter transcript=eq;prot=eq;pid=Medtr5g094760.1; - 5 No
OS09G24924 osa transporter family protein, putative, expressed transcript=eq;prot=eq; + 9 No
OSINDICA_09G19030 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC028759; + Chr09 No
PP00008G00490 ppa NULL name=estExt_Genewise1.C_80081,pid=202191,prot=eq,tid=202191 - scaffold_8 No
PP00008G00500 ppa NULL name=fgenesh1_pg.scaffold_8000054,pid=65852,prot=eq,tid=65852 + scaffold_8 No
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