Sub-family  

Parent family
HOM000859
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO003405 has 29 genes in 22 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G16660 aly name=fgenesh2_kg.3__1721__AT3G15660.2;pid=479020;prot=eq;tid=479020 - scaffold_3 No
AT3G15660 ath glutaredoxin 4 (GRX4); FUNCTIONS IN: metal ion binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin-related protein (InterPro:IPR004480), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin family protein (TAIR:AT4G04950.1); Has 5304 Blast hits to 5116 proteins in 1283 species: Archae - 26; Bacteria - 2189; Metazoa - 461; Fungi - 314; Plants - 385; Viruses - 0; Other Eukaryotes - 1929 (source: NCBI BLink).;glutaredoxin 4 transcript=eq;prot=eq; - 3 No
BD1G08020 bdi protein kinase C binding (Blast2GO) pid=Bradi1g08020.1;tid=Bradi1g08020.1;GeneName=Bradi1g08020;transcript=eq;prot=eq - Bd1 No
BD2G04637 bdi pid=Bradi2g04637.1;tid=Bradi2g04637.1;GeneName=Bradi2g04637;transcript=eq;prot=eq + Bd2 No
CP00010G02010 cpa name=evm.TU.supercontig_10.201;pid=evm.TU.supercontig_10.201;prot=eq;transcript=eq - supercontig_10 No
CR07G02810 cre name=STE_fgenesh2_pg.C_scaffold_6000393;pid=195767;prot=eq;tid=195767;transcript=eq + chromosome_7 No
GM07G03660 gma 07 pid=16266065;transcript=eq;prot=eq;name=Glyma07g03660.1 + Gm07 No
GM08G22430 gma 08 pid=16272086;transcript=eq;prot=eq;name=Glyma08g22430.1 - Gm08 No
GM13G44000 gma 13 pid=16293707;transcript=eq;prot=eq;name=Glyma13g44000.1 - Gm13 No
LJ3G000430 lja prot=eq;transcript=eq;scaffold=LjT34H24;name=chr3.LjT34H24.250.nd + chr3 No
ME04151G00630 mes PACid=17962965;RNAname=cassava4.1_017658m;GeneName=cassava4.1_017658m.g;transcript=eq;prot=eq + scaffold04151 No
ME04269G00040 mes PACid=17981075;RNAname=cassava4.1_017731m;GeneName=cassava4.1_017731m.g;transcript=eq;prot=eq - scaffold04269 No
MRCC299_11G04690 mrcc299 name=fgenesh2_pg.C_Chr_11000299;pid=103187;prot=eq;tid=103187;transcript=eq + Chr_11 No
MT2G103130 mtr Monothiol glutaredoxin-S15 (AHRD V1 ***- Q8LBK6); contains Interpro domain(s) IPR004480 Glutaredoxin-related protein transcript=eq;prot=eq;pid=Medtr2g103130.1; + 2 No
OL14G02690 olu NULL name=gwEuk.14.384.1,pid=8492,prot=eq,tid=8492 + Chr_14 No
OS01G07950 osa OsGrx%5FS15%2E2 %2D glutaredoxin subgroup II, expressed transcript=eq;prot=eq; + 1 No
OS01G34620 osa OsGrx%5FS15%2E1 %2D glutaredoxin subgroup II, expressed transcript=eq;prot=eq; + 1 No
OSINDICA_01G07420 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000508; + Chr01 No
OT15G01980 ota glutaredoxin family protein (ISS); name=OT15G01980;protein_id=CAL57617.1;prot=eq + chrom15 No
PP00001G02400 ppa NULL name=e_gw1.1.276.1,pid=110910,prot=eq,tid=110910 - scaffold_1 No
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